RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 IRF8Q02556 426 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 ZNF783Q6ZMS7 281 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 PAGE2Q7Z2X7 111 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 ASB11Q8WXH4 323 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 CEP295NLQ96MC4 621 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 DUSP21Q9H596 190 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 HMG20AQ9NP66 347 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 SCN3BQ9NY72 215 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 TPRKBQ9Y3C4 175 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 TSTA3Q13630 321 aaPredicted RBP23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 DUOXA1Q1HG43 343 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 SMU1Q2TAY7 513 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 PLEKHG6Q3KR16 790 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 XKR6Q5GH73 641 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 CHST14Q8NCH0 376 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 PROX1Q92786 737 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 SLC12A9Q9BXP2 914 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 TM9SF3Q9HD45 589 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 PABPN1LA6NDY0 278 aaKnown RBP23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 E7EQ34 232 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 JRKO75564 520 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 ABLIM3O94929 683 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 DNAJA1P31689 397 aaKnown RBP23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 NUDT6P53370 316 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 MAD2L1BPQ15013 274 aaPredicted RBP23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 RFX4Q33E94 735 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 PRSS36Q5K4E3 855 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 FBLIM1Q8WUP2 373 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 TESCQ96BS2 214 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 ACOT13Q9NPJ3 140 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 STOML2Q9UJZ1 356 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 THSD7BQ9C0I4 1608 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 SCN2BO60939 215 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 SRCP12931 536 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 CRYBA2P53672 197 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 CAPN13Q6MZZ7 669 aaPredicted RBP23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 SETD9Q8NE22 299 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 ELMO1Q92556 727 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 DNASE1L2Q92874 299 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 YIPF6Q96EC8 236 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 PALMDQ9NP74 551 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 DNAJC11Q9NVH1 559 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 RAPGEFL1Q9UHV5 662 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 TESMINQ9Y4I5 508 aa23.61■■□□□ 1.37
SPTSSA-201ENST00000298130 RGS10O43665 173 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 C1SP09871 688 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 OR56A5P0C7T3 313 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 MAGP20916 626 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 OR1E2P47887 323 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 DGKEP52429 567 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 PFN3P60673 137 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 OXA1LQ15070 435 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 HKDC1Q2TB90 917 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 SOWAHCQ53LP3 525 aaPredicted RBP23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 DPY19L3Q6ZPD9 716 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 TPRG1Q6ZUI0 275 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 CRIPAKQ8N1N5 446 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 RUBCNLQ9H714 662 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 B4GALT6Q9UBX8 382 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 WBP4O75554 376 aaKnown RBP23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 CD36P16671 472 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 GABRR2P28476 465 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 SLC6A12P48065 614 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 EIF2B2P49770 351 aaKnown RBP23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 ATN1P54259 1190 aaPredicted RBP23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 LHX8Q68G74 356 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 LRRC70Q7Z2Q7 622 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 SCRN2Q96FV2 425 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 ZNF300Q96RE9 604 aaPredicted RBP23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 TMEM175Q9BSA9 504 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 MRPL9Q9BYD2 267 aaKnown RBP23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 REEP1Q9H902 201 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 TPT1P8Q9HAU6 139 aa23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 ZBTB20Q9HC78 741 aaPredicted RBP23.6■■□□□ 1.37
SPTSSA-201ENST00000298130 FPR1P21462 350 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 ZC3H12BQ5HYM0 836 aaKnown RBP23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 LYPLAL1Q5VWZ2 237 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 Q6ZNB5 142 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 MIR1-1HGQ9H1L0 117 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 FZD4Q9ULV1 537 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 PREPP48147 710 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 ST13P50502 369 aaKnown RBP23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 SERPINA11Q86U17 422 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 CD99L2Q8TCZ2 262 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 APH1BQ8WW43 257 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 TMEM121BQ9BXQ6 578 aaPredicted RBP23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 SUV39H2Q9H5I1 410 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 RNF167Q9H6Y7 350 aa23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 NDRG4Q9ULP0 352 aaKnown RBP23.59■■□□□ 1.37
SPTSSA-201ENST00000298130 ANAPC1Q9H1A4 1944 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 M0QX08 132 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 KPNA4O00629 521 aaPredicted RBP23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 RRM2P31350 389 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 KCNC4Q03721 635 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 KIAA1614Q5VZ46 1190 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 FAM180BQ6P0A1 224 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 Q6ZVU0 165 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 MFSD4AQ8N468 514 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms