RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ENPP2Q13822 863 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM182AQ5T1J6 154 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZDHHC21Q8IVQ6 265 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 OR56A1Q8NGH5 318 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 BCL2L14Q9BZR8 327 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 S100A14Q9HCY8 104 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 HCFC1R1Q9NWW0 138 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 HCFC2Q9Y5Z7 792 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 ADRB3P13945 408 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 HMGCLP35914 325 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 RPS13P62277 151 aaKnown RBP17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC30A6Q6NXT4 461 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 GALNT5Q7Z7M9 940 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 IL22RA1Q8N6P7 574 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 COL21A1Q96P44 957 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 CLIC1O00299 241 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF823P16415 610 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 ALOX12P18054 663 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 YAP1P46937 504 aaKnown RBP17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC18A1P54219 525 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 GPR68Q15743 365 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 MAPK11Q15759 364 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 C7orf57Q8NEG2 295 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 CLSTN3Q9BQT9 956 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 IL21RQ9HBE5 538 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 H7BY64 318 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 STATHP02808 62 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 LEPRP48357 1165 aaKnown RBP17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 WNT7BP56706 349 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 SCD5Q86SK9 330 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 SNX33Q8WV41 574 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 PRAP1Q96NZ9 151 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 MCM8Q9UJA3 840 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 HYAL2Q12891 473 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 HLA-CQ95604 372 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 CENPNQ96H22 339 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 FCRL4Q96PJ5 515 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 TRIB3Q96RU7 358 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 YIPF4Q9BSR8 244 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 SMURF2Q9HAU4 748 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 KLRF1Q9NZS2 232 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 HEXBP07686 556 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 SRCP12931 536 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 OMPP47874 163 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 SPATA9Q9BWV2 254 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 XKR8Q9H6D3 395 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 H0YGN5 161 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 SERPINA1P01009 418 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 JUNP05412 331 aaKnown RBP17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 F7P08709 466 aaPredicted RBP17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 CAPGP40121 348 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 NR1H2P55055 460 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 PDSS1Q5T2R2 415 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 KLHL17Q6TDP4 642 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 SVOPLQ8N434 492 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 AP3S1Q92572 193 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 KAT2AQ92830 837 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 GPER1Q99527 375 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 BCKDKO14874 412 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 HERC3Q15034 1050 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC9B1Q4ZJI4 515 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 ACSBG2Q5FVE4 666 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 LCN1P1Q5VSP4 162 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 OR4F3Q6IEY1 312 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 FITM2Q8N6M3 262 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 TRMT2BQ96GJ1 504 aaKnown RBP17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 ACTL8Q9H568 366 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 CLK4Q9HAZ1 481 aaKnown RBP17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 HMGB3O15347 200 aaKnown RBP17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 AKAP8O43823 692 aaKnown RBP17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 THEGLP0DJG4 465 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 TAB1Q15750 504 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 ISLR2Q6UXK2 745 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 MMABQ96EY8 250 aaPredicted RBP17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 SCRN2Q96FV2 425 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 CIB1Q99828 191 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 HMG20AQ9NP66 347 aa17.19■□□□□ 0.34
CDC42EP3-201ENST00000295324 OR6C74A6NCV1 312 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 hCG_2039718K7EN88 272 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 PRAMEF12O95522 483 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 THRBP10828 461 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 CLCN4P51793 760 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 GSCP56915 257 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 BNIP1Q12981 228 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM26DQ5JW98 314 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 MPP7Q5T2T1 576 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 HNRNPA2B1P22626 353 aaKnown RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 SPINT3P49223 89 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 ARFIP1P53367 373 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 FOLH1Q04609 750 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 KLF1Q13351 362 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 CPXM2Q8N436 756 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM120CQ9NX05 1096 aaKnown RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 FZD4Q9ULV1 537 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 RNF11Q9Y3C5 154 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 PGRMC2O15173 223 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 GLDCP23378 1020 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 EEFSECP57772 596 aaKnown RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 GLI3P10071 1580 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms