RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 FRG2BQ96QU4 278 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 HIST1H2AJQ99878 128 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 H2AFJQ9BTM1 129 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 YIPF2Q9BWQ6 316 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 BTBD2Q9BX70 525 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 WDR12Q9GZL7 423 aaKnown RBP16.33■□□□□ 0.2
CHRNE-201ENST00000293780 ACOT13Q9NPJ3 140 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 KRT84Q9NSB2 600 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 BTBD3Q9Y2F9 522 aa16.33■□□□□ 0.2
CHRNE-201ENST00000293780 ZBBXA8MT70 800 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 EFEMP2O95967 443 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 ALDH1A1P00352 501 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 LCKP06239 509 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 MAPK1P28482 360 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 MTAPQ13126 283 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 CHIT1Q13231 466 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 Q6ZPB1 254 aaPredicted RBP16.32■□□□□ 0.2
CHRNE-201ENST00000293780 ADCK1Q86TW2 530 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 DYNC2LI1Q8TCX1 351 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 MRPL9Q9BYD2 267 aaKnown RBP16.32■□□□□ 0.2
CHRNE-201ENST00000293780 NECTIN3Q9NQS3 549 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 PRDM8Q9NQV8 689 aa16.32■□□□□ 0.2
CHRNE-201ENST00000293780 RGS10O43665 173 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 IGSF6O95976 241 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 CD22P20273 847 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 SERPINA4P29622 427 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 HOXD12P35452 270 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 GSSP48637 474 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 RPP38P78345 283 aaKnown RBP16.31■□□□□ 0.2
CHRNE-201ENST00000293780 CREMQ03060 361 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 DNASE1L3Q13609 305 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 DDX39BQ13838 428 aaKnown RBP16.31■□□□□ 0.2
CHRNE-201ENST00000293780 DGUOKQ16854 277 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 TPRG1Q6ZUI0 275 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 TRMT2BQ96GJ1 504 aaKnown RBP16.31■□□□□ 0.2
CHRNE-201ENST00000293780 SCLYQ96I15 445 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 MTERF1Q99551 399 aaKnown RBP16.31■□□□□ 0.2
CHRNE-201ENST00000293780 APOL4Q9BPW4 351 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 KIF17Q9P2E2 1029 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 FAM8A1Q9UBU6 413 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 TMED5Q9Y3A6 229 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 MAGEB17A8MXT2 336 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 WBP4O75554 376 aaKnown RBP16.31■□□□□ 0.2
CHRNE-201ENST00000293780 EPN2O95208 641 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 LAMP1P11279 417 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 COX7A2P14406 83 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 GPX2P18283 190 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 TRPC1P48995 793 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 CXCR4P61073 352 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 AHSA2Q719I0 299 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 CBLL1Q75N03 491 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 ELMOD1Q8N336 334 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 OR6Q1Q8NGQ2 317 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 THUMPD1Q9NXG2 353 aaKnown RBP16.31■□□□□ 0.2
CHRNE-201ENST00000293780 KIAA1522Q9P206 1035 aaPredicted RBP16.31■□□□□ 0.2
CHRNE-201ENST00000293780 TRIM17Q9Y577 477 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
CHRNE-201ENST00000293780 HTR3EA5X5Y0 456 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 OR56A5P0C7T3 313 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 AQP1P29972 269 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 ST13P50502 369 aaKnown RBP16.3■□□□□ 0.2
CHRNE-201ENST00000293780 PFN3P60673 137 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 CDKL4Q5MAI5 379 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 KIAA1614Q5VZ46 1190 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 EIF3MQ7L2H7 374 aaKnown RBP16.3■□□□□ 0.2
CHRNE-201ENST00000293780 OR2AP1Q8NGE2 309 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 MAL2Q969L2 176 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 SCRN2Q96FV2 425 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 DNAJC11Q9NVH1 559 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 RPS6KA6Q9UK32 745 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 ERVW-1Q9UQF0 538 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 ZNF451Q9Y4E5 1061 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 HSPE1-MOB4S4R3N1 261 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 PRRG1O14668 218 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 VIPP01282 170 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 PRPS1L1P21108 318 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 CRYBA2P53672 197 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 VEPH1Q14D04 833 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 IQCCQ4KMZ1 466 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 ADNP2Q6IQ32 1131 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 TSPYL5Q86VY4 417 aaPredicted RBP16.3■□□□□ 0.2
CHRNE-201ENST00000293780 BBS7Q8IWZ6 715 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 SH3KBP1Q96B97 665 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 LGALS12Q96DT0 336 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 ITPKCQ96DU7 683 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 IGSF21Q96ID5 467 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 POLE4Q9NR33 117 aa16.3■□□□□ 0.2
CHRNE-201ENST00000293780 C8GP07360 202 aa16.29■□□□□ 0.2
CHRNE-201ENST00000293780 C1SP09871 688 aa16.29■□□□□ 0.2
CHRNE-201ENST00000293780 HOXB6P17509 224 aaKnown RBP16.29■□□□□ 0.2
CHRNE-201ENST00000293780 CSNK1DP48730 415 aa16.29■□□□□ 0.2
CHRNE-201ENST00000293780 TMED10P49755 219 aaKnown RBP16.29■□□□□ 0.2
CHRNE-201ENST00000293780 CYP4F8P98187 520 aa16.29■□□□□ 0.2
CHRNE-201ENST00000293780 NPRL3Q12980 569 aa16.29■□□□□ 0.2
CHRNE-201ENST00000293780 PLEKHG6Q3KR16 790 aa16.29■□□□□ 0.2
CHRNE-201ENST00000293780 CATSPEREQ5SY80 951 aa16.29■□□□□ 0.2
CHRNE-201ENST00000293780 PAGE2Q7Z2X7 111 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms