RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 OR6C70A6NIJ9 312 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CCRL2O00421 344 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 HCN1O60741 890 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 TOP3BO95985 862 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 DNAJA1P31689 397 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CBX5P45973 191 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 LAPTM5Q13571 262 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 TXNDC8Q6A555 127 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 LDB1Q86U70 411 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 NPAS3Q8IXF0 933 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SHKBP1Q8TBC3 707 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 PIWIL1Q96J94 861 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 MYRFLQ96LU7 910 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 OR52B2Q96RD2 323 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 KXD1Q9BQD3 176 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 PRDM6Q9NQX0 595 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 EIF3KQ9UBQ5 218 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF282Q9UDV7 671 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 MAP4K5Q9Y4K4 846 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 A0A1W2PQH9 124 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 HEPACAM2A8MVW5 462 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ITM2AO43736 263 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ECI2O75521 394 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CD247P20963 164 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CD72P21854 359 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 HERVK_113P63132 956 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 DSC2Q02487 901 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 LRRC32Q14392 662 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 DPYSL2Q16555 572 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF404Q494X3 552 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SFT2D3Q587I9 215 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 DCAF12L1Q5VU92 463 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMC8Q8IU68 726 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC30A8Q8IWU4 369 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 RAVER1Q8IY67 606 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CENPSQ8N2Z9 138 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 TTC9BQ8N6N2 239 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 BEND7Q8N7W2 519 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 RERGQ96A58 199 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF707Q96C28 371 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 FEM1CQ96JP0 617 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 KCTD7Q96MP8 289 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 MCCC1Q96RQ3 725 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ERVK-6Q9BXR3 956 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ITPAQ9BY32 194 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 TBC1D17Q9HA65 648 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZIM2Q9NZV7 527 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 FNDC1Q4ZHG4 1894 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 E9PAM4 449 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 PENKP01210 267 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 PABPC4LP0CB38 370 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC2A2P11168 524 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 FMO3P31513 532 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CHIT1Q13231 466 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 MAB21L1Q13394 359 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 XKR5Q6UX68 686 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC22A16Q86VW1 577 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 BRSK1Q8TDC3 778 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF354BQ96LW1 612 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 IRF2BPLQ9H1B7 796 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 STOX2Q9P2F5 926 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC27A6Q9Y2P4 619 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SIP14410 1827 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 A0A1W2PPW3 197 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 TRIM64CA6NLI5 447 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 ISM1B1AKI9 464 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 H3BM21 787 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 ABCB7O75027 752 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 MTHFD1P11586 935 aaKnown RBP11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 ACSL1P33121 698 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 NAE1Q13564 534 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 MED27Q6P2C8 311 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMEM110Q86TL2 294 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 ANKRD46Q86W74 232 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 GPALPP1Q8IXQ4 340 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMBIM1Q969X1 311 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 PLD4Q96BZ4 506 aa11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 POLR2J3Q9H1A7 115 aaKnown RBP11.52□□□□□ -0.56
SYNGAP1-201ENST00000293748 C2CD4DB7Z1M9 353 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 MCIDASD6RGH6 385 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 INMTO95050 263 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 GOT2P00505 430 aaKnown RBP11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 IGFBP6P24592 240 aaPredicted RBP11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 GSK3BP49841 420 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF132P52740 706 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 ITPRIPL2Q3MIP1 535 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 C6orf183Q5T699 404 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 NCCRP1Q6ZVX7 275 aaPredicted RBP11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 LIMS2Q7Z4I7 341 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 UBE2J2Q8N2K1 259 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 OR10H5Q8NGA6 315 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 CGREF1Q99674 301 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 C11orf16Q9NQ32 467 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 PCDHGA11Q9Y5H2 935 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 ATG13O75143 517 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 RSL1D1O76021 490 aaKnown RBP11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 APOC1P02654 83 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC1A2P43004 574 aa11.52□□□□□ -0.57
SYNGAP1-201ENST00000293748 NDST2P52849 883 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms