RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SAP18O00422 153 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 GPR32O75388 356 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 PSIP1O75475 530 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 KCNA5P22460 613 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 RYKP34925 604 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 SEPHS1P49903 392 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 GRIK2Q13002 908 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TUBA3CQ13748 450 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 PRR23CQ6ZRP0 262 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 C15orf40Q8WUR7 153 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 NCSTNQ92542 709 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ART5Q96L15 291 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 GAL3ST4Q96RP7 486 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 GSDMCQ9BYG8 508 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ADAM7Q9H2U9 754 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TMEM9Q9P0T7 183 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 FABP12A6NFH5 140 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ERI3O43414 337 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ADH1BP00325 375 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 FMO3P31513 532 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 HSF2Q03933 536 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 EOGTQ5NDL2 527 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 POMZP3Q6PJE2 187 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TMIGD1Q6UXZ0 262 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 CMTM8Q8IZV2 173 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 KLHL6Q8WZ60 621 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 SIPA1Q96FS4 1042 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 IGSF21Q96ID5 467 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 UCK2Q9BZX2 261 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TPT1P8Q9HAU6 139 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 NDRG2Q9UN36 371 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ZNF3P17036 446 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 BDKRB1P46663 353 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 CLCNKAP51800 687 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ARHGDIBP52566 201 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 FCHO2Q0JRZ9 810 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 C14orf80Q86SX3 495 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TMEM145Q8NBT3 493 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 KBTBD7Q8WVZ9 684 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ITPAQ9BY32 194 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TRIM39Q9HCM9 518 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TCF7L1Q9HCS4 588 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ADAP2Q9NPF8 381 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 GIN1Q9NXP7 522 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ELOA3DA6NLF2 546 aaPredicted RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ELOA3BQ3SY89 546 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 NIPAL1Q6NVV3 410 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 TMEM135Q86UB9 458 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 FLCNQ8NFG4 579 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ELOA3Q8NG57 546 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 NEK7Q8TDX7 302 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CYB5D2Q8WUJ1 264 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 LGR4Q9BXB1 951 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 TAC3Q9UHF0 121 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 RBM7Q9Y580 266 aaKnown RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 PRODHO43272 600 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 AKAP8O43823 692 aaKnown RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 GALTP07902 379 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 C7P10643 843 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 HSD3B1P14060 373 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 HSD3B2P26439 372 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CBX5P45973 191 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 NRG3P56975 720 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 RAB2AP61019 212 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 SEMG2Q02383 582 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ST3GAL3Q11203 375 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 GANABQ14697 944 aaKnown RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 FBXO15Q8NCQ5 510 aaPredicted RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CRYGNQ8WXF5 182 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 KCTD7Q96MP8 289 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 MND1Q9BWT6 205 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ZNF395Q9H8N7 513 aaPredicted RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 SP140LQ9H930 580 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 LYARQ9NX58 379 aaKnown RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 UTS2RQ9UKP6 389 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 OARD1Q9Y530 152 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 PSAT1Q9Y617 370 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ANXA2P2A6NMY6 339 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ANXA2P07355 339 aaKnown RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CCL5P13501 91 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CD1DP15813 335 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 GDI1P31150 447 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 SLC6A4P31645 630 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CCKBRP32239 447 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CLCN2P51788 898 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 RAB30Q15771 203 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ATG9BQ674R7 924 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CNDP2Q96KP4 475 aaKnown RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 MRGPRX2Q96LB1 330 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 OR51V1Q9H2C8 321 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 MEAF6Q9HAF1 191 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 HCN3Q9P1Z3 774 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 NKX1-2Q9UD57 310 aaPredicted RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms