RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CLCQ05315 142 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 CEACAM7Q14002 265 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TAS1R1Q7RTX1 841 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 HID1Q8IV36 788 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 BORCS6Q96GS4 357 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF514Q96K75 400 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ITPAQ9BY32 194 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 WDR26Q9H7D7 661 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TEX264Q9Y6I9 313 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ECM29Q5VYK3 1845 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 GSAPA4D1B5 854 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 WNT9AO14904 365 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 COQ9O75208 318 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ERN1O75460 977 aaKnown RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TNFP01375 233 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC2A2P11168 524 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 POU2F1P14859 743 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC6A2P23975 617 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 GNPDA1P46926 289 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 LCP2Q13094 533 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 CRTC2Q53ET0 693 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ATXN7L2Q5T6C5 722 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 PIK3R6Q5UE93 754 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC36A4Q6YBV0 504 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 CDHR3Q6ZTQ4 885 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 USP30Q70CQ3 517 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 BEND5Q7L4P6 421 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 LDB1Q86U70 411 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC37A3Q8NCC5 494 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 RERGQ96A58 199 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 LINGO1Q96FE5 620 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 MAGEB10Q96LZ2 347 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC30A2Q9BRI3 323 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 PHF7Q9BWX1 381 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 NUSAP1Q9BXS6 441 aaKnown RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TXLNGYQ9BZA5 131 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 MMP27Q9H306 513 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 LMAN1LQ9HAT1 526 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 COQ3Q9NZJ6 369 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ASF1AQ9Y294 204 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 LAMA4Q16363 1823 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 OR5F1O95221 314 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TNNI3P19429 210 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 FUT4P22083 530 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 NMBRP28336 390 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 HTR2BP41595 481 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF132P52740 706 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SMIM11AP58511 58 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 PIGFQ07326 219 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 COL13A1Q5TAT6 717 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 UBE2UQ5VVX9 321 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 ADAMTSL2Q86TH1 951 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 POLR2J2Q9GZM3 115 aaKnown RBP11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 RACGAP1Q9H0H5 632 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 DPEP2Q9H4A9 486 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TIGARQ9NQ88 270 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 EMC3Q9P0I2 261 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 SCML1Q9UN30 329 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 TESMINQ9Y4I5 508 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 PCDHGC4Q9Y5F7 938 aa11.08□□□□□ -0.64
NPC1L1-201ENST00000289547 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 LOC100130705A0A1B0GUX0 176 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM159BA6NKW6 160 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM25EA8MYX2 175 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 STC2O76061 302 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 PRKACAP17612 351 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 EEFSECP57772 596 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 RPL6Q02878 288 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ZBTB6Q15916 424 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 PLEKHG7Q6ZR37 379 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 GPR135Q8IZ08 494 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 PCDH19Q8TAB3 1148 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 TUBA1CQ9BQE3 449 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 RPF2Q9H7B2 306 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 DHRS7Q9Y394 339 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ISM1B1AKI9 464 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 SYPP08247 313 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF30P17039 623 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC2A7Q6PXP3 512 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 Q6ZVU0 165 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF567Q8N184 647 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ZC3H10Q96K80 434 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC2A13Q96QE2 648 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 TBC1D24Q9ULP9 559 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 GOLGA4Q13439 2230 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ANKDD1BA6NHY2 528 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 F7P08709 466 aaPredicted RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 EPORP19235 508 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 PSMA3P25788 255 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 DUSP3P51452 185 aaPredicted RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 PMS2P3Q13401 168 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 GPR149Q86SP6 731 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ART5Q96L15 291 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 QRFPRQ96P65 431 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 IMP3Q9NV31 184 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 CORO2BQ9UQ03 480 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 IRAK3Q9Y616 596 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms