RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PLEKHM1Q9Y4G2 1056 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 KLK4Q9Y5K2 254 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 SNX11Q9Y5W9 270 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 TMEM131Q92545 1883 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 CACNA1CQ13936 2221 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 SERTM1A2A2V5 107 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 SLCO1B7G3V0H7 640 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 K7EPI3 171 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 MATN2O00339 956 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 PCDHGA12O60330 932 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 OR10H2O60403 315 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 ENO1P06733 434 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC1A6P48664 564 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 MASP1P48740 699 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 CSNK1EP49674 416 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 GRIK2Q13002 908 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 PFKFB4Q16877 469 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 AP5B1Q2VPB7 878 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 PRAMEF14Q5SWL7 426 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 IRGCQ6NXR0 463 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 MTFMTQ96DP5 389 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 FERD3LQ96RJ6 166 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 CCT7Q99832 543 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 NUSAP1Q9BXS6 441 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 C12orf65Q9H3J6 166 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 EXOSC4Q9NPD3 245 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 STX18Q9P2W9 335 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 RAP2CQ9Y3L5 183 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 PCNX1Q96RV3 2341 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 A0A1B0GVT2 93 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 ARHGAP33O14559 1287 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 AKAP10O43572 662 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC34A2O95436 690 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 RETP07949 1114 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 ANXA6P08133 673 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 ALPPL2P10696 532 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 CDH3P22223 829 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 HRH2P25021 359 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 MAOBP27338 520 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 IMPA1P29218 277 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 CHI3L1P36222 383 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 CCT8P50990 548 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 RAB28P51157 221 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 GTF2A1P52655 376 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 CLPPQ16740 277 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 PHF19Q5T6S3 580 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 NAPRTQ6XQN6 538 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 SEC16BQ96JE7 1060 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 JSRP1Q96MG2 331 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 MECRQ9BV79 373 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 NTMT1Q9BV86 223 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 GATA5Q9BWX5 397 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 NLNQ9BYT8 704 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC29A3Q9BZD2 475 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 PELI2Q9HAT8 420 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 TMEM74BQ9NUR3 256 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 OPTCQ9UBM4 332 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 RPS6KB2Q9UBS0 482 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 TRPS1Q9UHF7 1281 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 PSMD13Q9UNM6 376 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 TRIM33Q9UPN9 1127 aa8.15□□□□□ -1.11
PTPDC1-201ENST00000288976 NEMP2A6NFY4 417 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SCN2BO60939 215 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 STK16O75716 305 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 RPSAP08865 295 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 IRX1P78414 480 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 LRRC36Q1X8D7 754 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 C1orf146Q5VVC0 180 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 CAPN13Q6MZZ7 669 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ARL10Q8N8L6 244 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 FAM181AQ8N9Y4 354 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 FAM46DQ8NEK8 389 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 OR5AR1Q8NGP9 310 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 LMX1AQ8TE12 382 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 MIPEPQ99797 713 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ECSITQ9BQ95 431 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 TCEAL2Q9H3H9 227 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 Q9H521 79 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 DNAJC11Q9NVH1 559 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 DNAAF2Q9NVR5 837 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 NMRK1Q9NWW6 199 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 OR6C2Q9NZP2 312 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ATXN2Q99700 1313 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ANKDD1BA6NHY2 528 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 EDF1O60869 148 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 FGF4P08620 206 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ABATP80404 500 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 IRF8Q02556 426 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 BST1Q10588 318 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 GTF2H2Q13888 395 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SF1Q15637 639 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 INAVAQ3KP66 663 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 TMEM164Q5U3C3 297 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 GTF2H2CQ6P1K8 395 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 AGTRAPQ6RW13 159 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 FAM180AQ6UWF9 173 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 GOLGA7Q7Z5G4 137 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 MILR1Q7Z6M3 343 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 CARFQ8N187 725 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms