RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 HKDC1Q2TB90 917 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 ARSIQ5FYB1 569 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.74□□□□□ -0.856e-7■■■■□ 20.3
HMGCR-201ENST00000287936 OXR1Q8N573 874 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 MINDY2Q8NBR6 621 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 OTUB1Q96FW1 271 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-201ENST00000287936 ZNF514Q96K75 400 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-201ENST00000287936 ZNF225Q9UK10 706 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 PCDHB11Q9Y5F2 797 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 A0A1B0GTW7 788 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 ASPDHA6ND91 283 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 SNTNA6NMZ2 147 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 ACOX3O15254 700 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 TEX28O15482 410 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 JUNBP17275 347 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-201ENST00000287936 NR4A1P22736 598 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 CRHBPP24387 322 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 ZC3H12BQ5HYM0 836 aaKnown RBP9.74□□□□□ -0.85
HMGCR-201ENST00000287936 RIMKLAQ8IXN7 391 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 CXorf40AQ8TE69 158 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 TRUB1Q8WWH5 349 aaKnown RBP9.74□□□□□ -0.85
HMGCR-201ENST00000287936 APIPQ96GX9 242 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 C6orf62Q9GZU0 229 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-201ENST00000287936 CREBZFQ9NS37 354 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 TDRKHQ9Y2W6 561 aaKnown RBP9.74□□□□□ -0.85
HMGCR-201ENST00000287936 AP1M2Q9Y6Q5 423 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 MYO16Q9Y6X6 1858 aa9.74□□□□□ -0.85
HMGCR-201ENST00000287936 TRBV5-4A0A0C4DH59 114 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ADH1CP00326 375 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 GSTM1P09488 218 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ITGAMP11215 1152 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 CCR7P32248 378 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 RYKP34925 604 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 GSTM4Q03013 218 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 FGD3Q5JSP0 725 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 CASP12Q6UXS9 341 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 RNF165Q6ZSG1 346 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 MCFD2Q8NI22 146 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 Q96MT0 163 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 TCF25Q9BQ70 676 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 INPP5KQ9BT40 448 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ROGDIQ9GZN7 287 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 LHPPQ9H008 270 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 THG1LQ9NWX6 298 aaKnown RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 GULP1Q9UBP9 304 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 STOML2Q9UJZ1 356 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 MAN2B2Q9Y2E5 1009 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 PLK4O00444 970 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 MRPS14O60783 128 aaKnown RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 AMD1P17707 334 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 PSMA3P25788 255 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 SHMT2P34897 504 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 GRSF1Q12849 480 aaKnown RBP eCLIP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 PERM1Q5SV97 790 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 CPZQ66K79 652 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 SUSD1Q6UWL2 747 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 Q6ZVL8 140 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 DCP2Q8IU60 420 aaKnown RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 CFAP206Q8IYR0 622 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 CHDHQ8NE62 594 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 LRIG1Q96JA1 1093 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 VPS35Q96QK1 796 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ZNF334Q9HCZ1 680 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 RAPGEFL1Q9UHV5 662 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ERVW-1Q9UQF0 538 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 DLGAP4Q9Y2H0 992 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 TESMINQ9Y4I5 508 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 DOCK3Q8IZD9 2030 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 PI15O43692 258 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 MPZL2O60487 215 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ATE1O95260 518 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 DLGAP3O95886 979 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ITIH1P19827 911 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 EFNA1P20827 205 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 BDKRB1P46663 353 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 PSMD7P51665 324 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 C1DQ13901 141 aaKnown RBP9.73□□□□□ -0.85
HMGCR-201ENST00000287936 KEAP1Q14145 624 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ZZZ3Q8IYH5 903 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 SPARTQ8N0X7 666 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 L3MBTL4Q8NA19 623 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 OR10G2Q8NGC3 310 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 OR52E4Q8NGH9 312 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 OR10Q1Q8NGQ4 319 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 OR13F1Q8NGS4 319 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ADAMTS16Q8TE57 1224 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ASB11Q8WXH4 323 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 IRF7Q92985 503 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ZIC5Q96T25 663 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 COPS4Q9BT78 406 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ANKHQ9HCJ1 492 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 GPRC5BQ9NZH0 403 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 ASF1AQ9Y294 204 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 POFUT2Q9Y2G5 429 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 PCDHGA8Q9Y5G5 932 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 PDZK1P1A8MUH7 402 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 C1QTNF3-AMACRE9PGA6 284 aa9.73□□□□□ -0.85
HMGCR-201ENST00000287936 TYRP14679 529 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms