RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 C12orf71A8MTZ7 269 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 HAS3O00219 553 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ELFN1P0C7U0 828 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC2A2P11168 524 aaPredicted RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ABRAXAS2Q15018 415 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 TMEM199Q8N511 208 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 OR52L1Q8NGH7 329 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 MOSPD2Q8NHP6 518 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ATL1Q8WXF7 558 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 PSKH2Q96QS6 385 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 IL4I1Q96RQ9 567 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 MUC13Q9H3R2 512 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 FAM83DQ9H4H8 585 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 NLE1Q9NVX2 485 aaPredicted RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF232Q9UNY5 417 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 KIAA0100Q14667 2235 aaKnown RBP12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 C2orf78A6NCI8 922 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 H3BNH8 94 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 I6L893 689 aaPredicted RBP12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 LDB2O43679 373 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF623O75123 536 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 ERAL1O75616 437 aaKnown RBP12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 ALDOCP09972 364 aaKnown RBP12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 FDXRP22570 491 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 UBE2UQ5VVX9 321 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 CCSAPQ6IQ19 270 aaPredicted RBP12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 FAM171BQ6P995 826 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 OTOP2Q7RTS6 562 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC37A3Q8NCC5 494 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 KLHDC9Q8NEP7 349 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 PIGUQ9H490 435 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 SCN1AP35498 2009 aa12.21□□□□□ -0.46
SLC6A1-201ENST00000287766 ARPC4-TTLL3A0A0A6YYG9 625 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 C7orf72A4D263 438 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ERN1O75460 977 aaKnown RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 SCELO95171 688 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 CXCL14O95715 111 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 MATN1P21941 496 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 RGRP47804 291 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 AP1S1P61966 158 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 FAM189BP81408 668 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 MAB21L1Q13394 359 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 UAP1L1Q3KQV9 507 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 GTDC1Q4AE62 458 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 BLOC1S3Q6QNY0 202 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 RBM23Q86U06 439 aaKnown RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 MFSD6LQ8IWD5 586 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 HS3ST5Q8IZT8 346 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 FRMD6Q96NE9 622 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 GPN1Q9HCN4 374 aaPredicted RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 TREX1Q9NSU2 369 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 RIMS3Q9UJD0 308 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 YIPF1Q9Y548 306 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 MTRF1O75570 445 aaKnown RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 CDK4P11802 303 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 DPP6P42658 865 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ARSFP54793 590 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 BTBD16Q32M84 506 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 PTCHD3Q3KNS1 767 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 RBM48Q5RL73 367 aaKnown RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF773Q6PK81 442 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 CFAP206Q8IYR0 622 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC15A4Q8N697 577 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 LINC01465Q8N7H1 131 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF420Q8TAQ5 688 aaPredicted RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 FUBP1Q96AE4 644 aaKnown RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC7A5P2Q9GIP4 190 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 C11orf16Q9NQ32 467 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ZIM2Q9NZV7 527 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 OR14I1A6ND48 311 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 H7C2Y5 167 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 STX16O14662 325 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ABCB7O75027 752 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ECDO95905 644 aaPredicted RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 CYP11A1P05108 521 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 TFAP2AP05549 437 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 NR4A2P43354 598 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 STK19P49842 368 aaPredicted RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 RORCP51449 518 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 MTSS1LQ765P7 747 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 TMCO2Q7Z6W1 182 aaPredicted RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 REPS1Q96D71 796 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 PRICKLE1Q96MT3 831 aaPredicted RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF599Q96NL3 588 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 YTHDF1Q9BYJ9 559 aaKnown RBP12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 CTPS2Q9NRF8 586 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 Q9Y3F1 56 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 DOCK5Q9H7D0 1870 aa12.2□□□□□ -0.46
SLC6A1-201ENST00000287766 PLD2O14939 933 aa12.19□□□□□ -0.46
SLC6A1-201ENST00000287766 PER2O15055 1255 aa12.19□□□□□ -0.46
SLC6A1-201ENST00000287766 HLA-DQA2P01906 255 aa12.19□□□□□ -0.46
SLC6A1-201ENST00000287766 NSG1P42857 185 aa12.19□□□□□ -0.46
SLC6A1-201ENST00000287766 CCR4P51679 360 aa12.19□□□□□ -0.46
SLC6A1-201ENST00000287766 SMIM11AP58511 58 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms