RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CDH18Q13634 790 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 BOP1Q14137 746 aaKnown RBP12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 GPR33Q49SQ1 333 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 GGTA1PQ4G0N0 100 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 COLEC12Q5KU26 742 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 PRAMEF9Q5VWM5 478 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 GPR153Q6NV75 609 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 TPGS1Q6ZTW0 290 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 MSANTD1Q6ZTZ1 278 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 NEK10Q6ZWH5 1172 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 CYP2U1Q7Z449 544 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 ZSWIM9Q86XI8 627 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 ARMC8Q8IUR7 673 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 HTRA1Q92743 480 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 COPS4Q9BT78 406 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 EPS8L2Q9H6S3 715 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 ZNF451Q9Y4E5 1061 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 C9P02748 559 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 GSTT2P0CG29 244 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 GSTT2BP0CG30 244 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 CBSLP0DN79 551 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 PRPS1L1P21108 318 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 AOAHP28039 575 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 CBSP35520 551 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 NSG1P42857 185 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 TPTEP56180 551 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 HSPA14Q0VDF9 509 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 ERICH5Q6P6B1 374 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 OVCA2Q8WZ82 227 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 PROX1Q92786 737 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 ALG14Q96F25 216 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 NMRK2Q9NPI5 230 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 KIAA1522Q9P206 1035 aaPredicted RBP12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 RNF6Q9Y252 685 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 SLC22A14Q9Y267 594 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 PCDHB7Q9Y5E2 793 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 PCDHGA6Q9Y5G7 932 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 TBX1O43435 398 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 SCN2BO60939 215 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 UPK1BO75841 260 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 NTRK1P04629 796 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 NUDT7P0C024 238 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 COX7A2P14406 83 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 GADD45AP24522 165 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 C21orf33P30042 268 aaPredicted RBP12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 SEPHS1P49903 392 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 B4GALNT1Q00973 533 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 SELENBP1Q13228 472 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 SF1Q15637 639 aaKnown RBP12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 CARTPTQ16568 116 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 ZNF404Q494X3 552 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 FRG2Q64ET8 278 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 SAPCD2Q86UD0 394 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 LYSMD2Q8IV50 215 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 P3H2Q8IVL5 708 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 L3MBTL4Q8NA19 623 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 PCSK9Q8NBP7 692 aaKnown RBP12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 CSGALNACT1Q8TDX6 532 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 FRG2BQ96QU4 278 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 C6orf62Q9GZU0 229 aaPredicted RBP12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 AMBNQ9NP70 447 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 TSC22D4Q9Y3Q8 395 aa12.82□□□□□ -0.36
SLC28A1-201ENST00000286749 M0R082 166 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 YY2O15391 372 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 PABPC1P11940 636 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 AQP1P29972 269 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 SLC6A12P48065 614 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 TUFMP49411 452 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 HNRNPFP52597 415 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 SMAD3P84022 425 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 ELAVL2Q12926 359 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 KCNJ8Q15842 424 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 IQCCQ4KMZ1 466 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 KIAA1958Q8N8K9 716 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 SCAIQ8N9R8 606 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 HRASLS5Q96KN8 279 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 ZDHHC3Q9NYG2 299 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 MBD1Q9UIS9 605 aaPredicted RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 METTL15A6NJ78 407 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 GALTP07902 379 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 HIST1H2AGP0C0S8 130 aaPredicted RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 DBTP11182 482 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 HIST1H2ADP20671 130 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 RRM2P31350 389 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 ACLYP53396 1101 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 CRYBA2P53672 197 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 SRSF11Q05519 484 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 ABRQ12979 859 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 CHIT1Q13231 466 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 TAF12Q16514 161 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 CDKL4Q5MAI5 379 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 RFLNAQ6ZTI6 216 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 GPR155Q7Z3F1 870 aa12.81□□□□□ -0.36
SLC28A1-201ENST00000286749 VRK3Q8IV63 474 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms