RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 AAK1Q2M2I8 961 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 FUT10Q6P4F1 479 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 PRSS55Q6UWB4 352 aaPredicted RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 TMEM199Q8N511 208 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 NKAPQ8N5F7 415 aaKnown RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 LSM14AQ8ND56 463 aaKnown RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 MDGA1Q8NFP4 955 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 PJA1Q8NG27 643 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 ESAMQ96AP7 390 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 RNF31Q96EP0 1072 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 TOE1Q96GM8 510 aaKnown RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 ZIC5Q96T25 663 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 RBM4BQ9BQ04 359 aaKnown RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 MGME1Q9BQP7 344 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 RBM4Q9BWF3 364 aaKnown RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 TUBB1Q9H4B7 451 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 SLC52A3Q9NQ40 469 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 SCN3BQ9NY72 215 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 CD274Q9NZQ7 290 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 TMEFF2Q9UIK5 374 aaPredicted RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 TRMT6Q9UJA5 497 aaKnown RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 TSR3Q9UJK0 312 aaKnown RBP7.4□□□□□ -1.22
TRIM6-201ENST00000278302 NUP50Q9UKX7 468 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 RIMKLBQ9ULI2 386 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 MAN2B2Q9Y2E5 1009 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 TPRKBQ9Y3C4 175 aa7.4□□□□□ -1.22
TRIM6-201ENST00000278302 LCHNA4D1U4 455 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 OR2A25A4D2G3 310 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 PLD2O14939 933 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 STX7O15400 261 aaKnown RBP7.4□□□□□ -1.23
TRIM6-201ENST00000278302 ARHGEF9O43307 516 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 KDELR3O43731 214 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 KCNJ13O60928 360 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 OR2B3O76000 313 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 GJB5O95377 273 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 ITGA2P17301 1181 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 CFL1P23528 166 aaKnown RBP7.4□□□□□ -1.23
TRIM6-201ENST00000278302 HOXD9P28356 352 aaPredicted RBP7.4□□□□□ -1.23
TRIM6-201ENST00000278302 MC4RP32245 332 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 SLC11A1P49279 550 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 CRISP3P54108 245 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 TAF12Q16514 161 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 RTP2Q5QGT7 225 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 DET1Q7L5Y6 550 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 CACTIN-AS1Q8N1I8 211 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 PAF1Q8N7H5 531 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 GALNT11Q8NCW6 608 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 ZFAND1Q8TCF1 268 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 TBCDQ9BTW9 1192 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 ITPAQ9BY32 194 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 SDR39U1Q9NRG7 319 aaPredicted RBP7.4□□□□□ -1.23
TRIM6-201ENST00000278302 COMMD8Q9NX08 183 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 USE1Q9NZ43 259 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 GALPQ9UBC7 116 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 HCSTQ9UBK5 93 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 ABT1Q9ULW3 272 aaKnown RBP7.4□□□□□ -1.23
TRIM6-201ENST00000278302 RAI2Q9Y5P3 530 aa7.4□□□□□ -1.23
TRIM6-201ENST00000278302 TMEM88BA6NKF7 163 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 CLDN24A6NM45 220 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 M0R082 166 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 HPRP00739 348 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 HSMCR30P0CW71 290 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 PKMP14618 531 aaKnown RBP7.39□□□□□ -1.23
TRIM6-201ENST00000278302 KRT20P35900 424 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 DCTP40126 519 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 HNF4AP41235 474 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 AGTR2P50052 363 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 ZNF140P52738 457 aaPredicted RBP7.39□□□□□ -1.23
TRIM6-201ENST00000278302 IL2P60568 153 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 HOXC5Q00444 222 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 C5orf22Q49AR2 442 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 SPATA19Q7Z5L4 167 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 SIDT2Q8NBJ9 832 aaKnown RBP7.39□□□□□ -1.23
TRIM6-201ENST00000278302 OR8H1Q8NGG4 311 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 SLC38A4Q969I6 547 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 TRIB3Q96RU7 358 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 ADGRE3Q9BY15 652 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.39□□□□□ -1.23
TRIM6-201ENST00000278302 DNAJB9Q9UBS3 223 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 RAPGEFL1Q9UHV5 662 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 IKZF3Q9UKT9 509 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 VPS9D1Q9Y2B5 631 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 LYVE1Q9Y5Y7 322 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 CENPFP49454 3210 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 SLC9A3R1O14745 358 aaPredicted RBP7.39□□□□□ -1.23
TRIM6-201ENST00000278302 OR1I1O60431 355 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 NIPSNAP2O75323 286 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 CLDN11O75508 207 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 FHP07954 510 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 ANXA6P08133 673 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 HTR1EP28566 365 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 CTSKP43235 329 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 TTPAP49638 278 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 RHAGQ02094 409 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 RNF219Q5W0B1 726 aaPredicted RBP7.39□□□□□ -1.23
TRIM6-201ENST00000278302 PSAPL1Q6NUJ1 521 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 ANKS3Q6ZW76 656 aa7.39□□□□□ -1.23
TRIM6-201ENST00000278302 TAS1R1Q7RTX1 841 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms