RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 BCL7BQ9BQE9 202 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CNPPD1Q9BV87 410 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 FAM126AQ9BYI3 521 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-202ENST00000273342 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 KCNH6Q9H252 994 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 PADI3Q9ULW8 664 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 PNMA8CA0A1B0GUJ8 204 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 UNCXA6NJT0 531 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 SLC28A1O00337 649 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 ADORA3P0DMS8 318 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 PIK3CBP42338 1070 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 HTR3AP46098 478 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 CXCR4P61073 352 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 TUBA1BP68363 451 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 ABHD18Q0P651 414 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 SLAMF1Q13291 335 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 ARMC4Q5T2S8 1044 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 TUBA1AQ71U36 451 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 DENND1CQ8IV53 801 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 BEND7Q8N7W2 519 aaPredicted RBP12.52□□□□□ -0.4
COL8A1-202ENST00000273342 CD244Q9BZW8 370 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 ASB8Q9H765 288 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.4
COL8A1-202ENST00000273342 BNIP3LO60238 219 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 PRAMEF1O95521 474 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 ESR1P03372 595 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 SDC1P18827 310 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 ITPKAP23677 461 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 THPOP40225 353 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 FADDQ13158 208 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 MAD2L1Q13257 205 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-202ENST00000273342 DOC2BQ14184 412 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 VMACQ2NL98 169 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 UAP1L1Q3KQV9 507 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 SMUG1Q53HV7 270 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 SLC46A3Q7Z3Q1 461 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 SLC5A8Q8N695 610 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 GLB1L3Q8NCI6 653 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-202ENST00000273342 PEX13Q92968 403 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 TSPAN18Q96SJ8 248 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 PDFQ9HBH1 243 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 TAS2R9Q9NYW1 312 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 RAPGEFL1Q9UHV5 662 aa12.52□□□□□ -0.41
COL8A1-202ENST00000273342 IGLV3-10A0A075B6K4 115 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 KCNK5O95279 499 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 ADRA2AP08913 450 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 CKMT1AP12532 417 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 PTPN6P29350 595 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 PTGER3P43115 390 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 RGS6P49758 472 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 CD83Q01151 205 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF45Q02386 682 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 LYPD8Q6UX82 237 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF605Q86T29 641 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 CADM2Q8N3J6 435 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 KIAA1958Q8N8K9 716 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 PSKH2Q96QS6 385 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 SDHCQ99643 169 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 NIPSNAP1Q9BPW8 284 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 MGME1Q9BQP7 344 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 TLR8Q9NR97 1041 aaKnown RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 MS4A12Q9NXJ0 267 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 ARL15Q9NXU5 204 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 SCML2Q9UQR0 700 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 MYCP01106 439 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 EIF2S1P05198 315 aaKnown RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 PTPN2P17706 415 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 MAGEA2P43356 314 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 KIR3DL1P43629 444 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 CDH12P55289 794 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 CCL23P55773 120 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 INO80DQ53TQ3 878 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 OR9Q2Q8NGE9 314 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 IPCEF1Q8WWN9 437 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 PTPN18Q99952 460 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 ATG10Q9H0Y0 220 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 IMPAD1Q9NX62 359 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 RHCGQ9UBD6 479 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 SPASTQ9UBP0 616 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 PSORS1C1Q9UIG5 152 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 KLHL20Q9Y2M5 609 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 FCF1Q9Y324 198 aaKnown RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 H3BQ06 376 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 WWP2O00308 870 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 WNT9AO14904 365 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 STK16O75716 305 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 TNFSF8P32971 234 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 UGT2B15P54855 530 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 YBEYP58557 167 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 NKX3-2P78367 333 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 TUSC3Q13454 348 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 SLC44A2Q8IWA5 706 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 DNAJC22Q8N4W6 341 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms