RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 INPP5KQ9BT40 448 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 RMND5AQ9H871 391 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 SLC17A4Q9Y2C5 497 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 RPN2P04844 631 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 CEACAM5P06731 702 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 UMPSP11172 480 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 GGT1P19440 569 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 IL10P22301 178 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 KIR3DL1P43629 444 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 MRPS35P82673 323 aaKnown RBP16.03■□□□□ 0.16
CCDC40-201ENST00000269318 CYP2A13Q16696 494 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 PGS1Q32NB8 556 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 SPIN4Q56A73 249 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 GLYATQ6IB77 296 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 AMIGO2Q86SJ2 522 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 GPR180Q86V85 440 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 ANKFN1Q8N957 763 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 ZNF548Q8NEK5 533 aaPredicted RBP16.03■□□□□ 0.16
CCDC40-201ENST00000269318 TRPV3Q8NET8 790 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 EME1Q96AY2 570 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 BIRC7Q96CA5 298 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 SH3GL1Q99961 368 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 CPPED1Q9BRF8 314 aaPredicted RBP16.03■□□□□ 0.16
CCDC40-201ENST00000269318 THUMPD3Q9BV44 507 aaKnown RBP16.03■□□□□ 0.16
CCDC40-201ENST00000269318 PREBQ9HCU5 417 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 AGPAT4Q9NRZ5 378 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 ACSL5Q9ULC5 683 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 SCML1Q9UN30 329 aa16.03■□□□□ 0.16
CCDC40-201ENST00000269318 TDRKHQ9Y2W6 561 aaKnown RBP16.03■□□□□ 0.16
CCDC40-201ENST00000269318 CFAP20Q9Y6A4 193 aaKnown RBP16.03■□□□□ 0.16
CCDC40-201ENST00000269318 KANSL1LA0AUZ9 987 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 PRR19A6NJB7 356 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 SCN2BO60939 215 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 MYO1DO94832 1006 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 DRD1P21728 446 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 RPL10P27635 214 aaKnown RBP16.02■□□□□ 0.16
CCDC40-201ENST00000269318 CDKN2CP42773 168 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 CLCNKAP51800 687 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 WNT3P56703 355 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 FOLH1Q04609 750 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 SRSF11Q05519 484 aaKnown RBP16.02■□□□□ 0.16
CCDC40-201ENST00000269318 OR4F3Q6IEY1 312 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 GALNT18Q6P9A2 607 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 CHST15Q7LFX5 561 aaPredicted RBP16.02■□□□□ 0.16
CCDC40-201ENST00000269318 ANKRD46Q86W74 232 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 OR2T12Q8NG77 320 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 OR7A2PQ8NGA2 310 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 OR10A6Q8NH74 314 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 PPWD1Q96BP3 646 aaKnown RBP16.02■□□□□ 0.16
CCDC40-201ENST00000269318 NRTNQ99748 197 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 TIMM29Q9BSF4 260 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 REXO4Q9GZR2 422 aaKnown RBP16.02■□□□□ 0.16
CCDC40-201ENST00000269318 KAT8Q9H7Z6 458 aaKnown RBP16.02■□□□□ 0.16
CCDC40-201ENST00000269318 RMI1Q9H9A7 625 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 DMRT3Q9NQL9 472 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 SIRT5Q9NXA8 310 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 FZD4Q9ULV1 537 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 WDR37Q9Y2I8 494 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 AP3M1Q9Y2T2 418 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 TSC22D4Q9Y3Q8 395 aa16.02■□□□□ 0.16
CCDC40-201ENST00000269318 F5P12259 2224 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 AKAP10O43572 662 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 DENRO43583 198 aaKnown RBP16.02■□□□□ 0.15
CCDC40-201ENST00000269318 SH3BGRLO75368 114 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 SLC35G4P0C7Q5 338 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 ACP5P13686 325 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 HSD17B2P37059 387 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 PPP2CBP62714 309 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 PPP2CAP67775 309 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 MEF2AQ02078 507 aaPredicted RBP16.02■□□□□ 0.15
CCDC40-201ENST00000269318 MED21Q13503 144 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 LAPTM5Q13571 262 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 IER5LQ5T953 404 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 FAM129CQ86XR2 697 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 OR8J2Q8NGG1 315 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 NSMCE2Q96MF7 247 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 HAUS8Q9BT25 410 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 C1QTNF7Q9BXJ2 289 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 BTBD1Q9H0C5 482 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 TRIT1Q9H3H1 467 aaKnown RBP16.02■□□□□ 0.15
CCDC40-201ENST00000269318 COQ10BQ9H8M1 238 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 ANAPC2Q9UJX6 822 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 RAB26Q9ULW5 256 aa16.02■□□□□ 0.15
CCDC40-201ENST00000269318 PCM1Q15154 2024 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3EA0A087X179 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3KA0A087X1G2 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 MAGEA13PA6NCF6 341 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 H0YJX3 145 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 CDH1P12830 882 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 MAT2AP31153 395 aaKnown RBP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TIA1P31483 386 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 GZMMP51124 257 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 MRPS21P82921 87 aaKnown RBP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 GRSF1Q12849 480 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 HIST2H2ACQ16777 129 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms