RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SLC6A18Q96N87 628 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 TWSG1Q9GZX9 223 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 CLMPQ9H6B4 373 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 NT5DC2Q9H857 520 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 SIRT5Q9NXA8 310 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 LEF1Q9UJU2 399 aaPredicted RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 PRAMEF33A0A0G2JMD5 474 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 CFLARO15519 480 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 KDM1AO60341 852 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 NDUFS2O75306 463 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 SORBS2O94875 1100 aaKnown RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 PCNAP12004 261 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 F3P13726 295 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 SDC1P18827 310 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 HNRNPH1P31943 449 aaKnown RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 YBX1P67809 324 aaKnown RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 FOXM1Q08050 763 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 DDX39BQ13838 428 aaKnown RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 CEACAM7Q14002 265 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 SNCBQ16143 134 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 C6orf163Q5TEZ5 329 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 NOXRED1Q6NXP6 359 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 SLC30A9Q6PML9 568 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 RIPOR1Q6ZS17 1223 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 DCP2Q8IU60 420 aaKnown RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 KRT78Q8N1N4 520 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 MINDY1Q8N5J2 469 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 DPP10Q8N608 796 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 EFCAB3Q8N7B9 438 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 OR2A1Q8NGT9 310 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 CHTF18Q8WVB6 975 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 SH3KBP1Q96B97 665 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 KLHDC7BQ96G42 594 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 APOLD1Q96LR9 279 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 ZBTB18Q99592 522 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 HOPXQ9BPY8 73 aaPredicted RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 IER2Q9BTL4 223 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 ACAT2Q9BWD1 397 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 DPY30Q9C005 99 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 PITHD1Q9GZP4 211 aaPredicted RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 RHBGQ9H310 441 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 XKR8Q9H6D3 395 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 DMRT3Q9NQL9 472 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 TMEM181Q9P2C4 612 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 KLF15Q9UIH9 416 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 POMPQ9Y244 141 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 RUVBL1Q9Y265 456 aaKnown RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 SIT1Q9Y3P8 196 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 A0A1W2PR77 199 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 K7ESF4 209 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 NPPAP01160 153 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 CXCR2P25025 360 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 TACR1P25103 407 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 PSMB5P28074 263 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 SLC19A1P41440 591 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 CCR8P51685 355 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 RPS13P62277 151 aaKnown RBP15.75■□□□□ 0.11
TPM1-201ENST00000267996 REEP5Q00765 189 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 PRDX1Q06830 199 aaKnown RBP15.75■□□□□ 0.11
TPM1-201ENST00000267996 ILF3Q12906 894 aaKnown RBP eCLIP15.75■□□□□ 0.11
TPM1-201ENST00000267996 TIGD2Q4W5G0 525 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 PAGE3Q5JUK9 113 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 ICE2Q659A1 982 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 TMIGD1Q6UXZ0 262 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 MAMSTRQ6ZN01 415 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 VN1R5Q7Z5H4 357 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 PACS2Q86VP3 889 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 MFSD2AQ8NA29 543 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 ZNF740Q8NDX6 193 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 SNX19Q92543 992 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 AIF1LQ9BQI0 150 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 TCEAL2Q9H3H9 227 aaPredicted RBP15.75■□□□□ 0.11
TPM1-201ENST00000267996 CUEDC1Q9NWM3 386 aaPredicted RBP15.75■□□□□ 0.11
TPM1-201ENST00000267996 GID8Q9NWU2 228 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 PCDHB11Q9Y5F2 797 aa15.75■□□□□ 0.11
TPM1-201ENST00000267996 STK25O00506 426 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 CXCL12P48061 93 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 C21orf58P58505 322 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 MEF2AQ02078 507 aaPredicted RBP15.74■□□□□ 0.11
TPM1-201ENST00000267996 C1orf146Q5VVC0 180 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 PRMT9Q6P2P2 845 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 GALNT18Q6P9A2 607 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 IYDQ6PHW0 289 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 LAYNQ6UX15 382 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 RIMKLAQ8IXN7 391 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 ZFPM2Q8WW38 1151 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 LRRC58Q96CX6 371 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 TMEM74Q96NL1 305 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 GSDMCQ9BYG8 508 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 SPAG4Q9NPE6 437 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 NMRK1Q9NWW6 199 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 OR6C2Q9NZP2 312 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 ABCD2Q9UBJ2 740 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 ADGRE2Q9UHX3 823 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 MUTYHQ9UIF7 546 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 FANCMQ8IYD8 2048 aa15.74■□□□□ 0.11
TPM1-201ENST00000267996 ARHGEF17Q96PE2 2063 aaPredicted RBP15.74■□□□□ 0.11
TPM1-201ENST00000267996 PRMT3O60678 531 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 LMNAP02545 664 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 WNT1P04628 370 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms