RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TPRKBQ9Y3C4 175 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 SMIM30A4D0T7 59 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 PSMD11O00231 422 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 ETHE1O95571 254 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 STSP08842 583 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 EBLN1P0CF75 366 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 HMGA1P17096 107 aaKnown RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 CD70P32970 193 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 KDELR2P33947 212 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 SLC19A1P41440 591 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 BTG3Q14201 252 aaPredicted RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 UGT8Q16880 541 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 ENTHD1Q8IYW4 607 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 OR6Q1Q8NGQ2 317 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 DYNC2LI1Q8TCX1 351 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 PPP1R14BQ96C90 147 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 SAMD11Q96NU1 681 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 ZNF300Q96RE9 604 aaPredicted RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 COPS4Q9BT78 406 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 KCNH6Q9H252 994 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 DSN1Q9H410 356 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 REEP1Q9H902 201 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 USE1Q9NZ43 259 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 PCDHB1Q9Y5F3 818 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 TTC34A8MYJ7 566 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 CNOT3O75175 753 aaKnown RBP16.27■□□□□ 0.2
SQLE-201ENST00000265896 OXSR1O95747 527 aaPredicted RBP16.27■□□□□ 0.2
SQLE-201ENST00000265896 TRBC1P01850 177 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 RETP07949 1114 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 PREPP48147 710 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 CLDN8P56748 225 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 KCNJ8Q15842 424 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
SQLE-201ENST00000265896 TRIM46Q7Z4K8 759 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 OR9Q2Q8NGE9 314 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.2
SQLE-201ENST00000265896 FEVQ99581 238 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 BTBD2Q9BX70 525 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 ZDHHC6Q9H6R6 413 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 IL1RAPQ9NPH3 570 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 SCHIP1Q9P0W5 487 aaPredicted RBP16.27■□□□□ 0.2
SQLE-201ENST00000265896 DOCK6Q96HP0 2047 aa16.27■□□□□ 0.2
SQLE-201ENST00000265896 DYTNA2CJ06 578 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 NRG2O14511 850 aaPredicted RBP16.27■□□□□ 0.19
SQLE-201ENST00000265896 AIREO43918 545 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 PCDH7O60245 1069 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 FZD6O60353 706 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 EOMESO95936 686 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 CD22P20273 847 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 CRATP43155 626 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 MEF2AQ02078 507 aaPredicted RBP16.27■□□□□ 0.19
SQLE-201ENST00000265896 CAMK2GQ13555 558 aaPredicted RBP16.27■□□□□ 0.19
SQLE-201ENST00000265896 HIST2H2ACQ16777 129 aaPredicted RBP16.27■□□□□ 0.19
SQLE-201ENST00000265896 VMACQ2NL98 169 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 HMGN2P46Q86SG4 172 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 CALHM3Q86XJ0 350 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 PTOV1Q86YD1 416 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 NXPE1Q8N323 547 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 ZNF366Q8N895 744 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 APH1BQ8WW43 257 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 CASD1Q96PB1 797 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 KCNS3Q9BQ31 491 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 SLIRPQ9GZT3 109 aaKnown RBP16.27■□□□□ 0.19
SQLE-201ENST00000265896 OGDHLQ9ULD0 1010 aa16.27■□□□□ 0.19
SQLE-201ENST00000265896 PLXNA4Q9HCM2 1894 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 HTR3EA5X5Y0 456 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 MAGEB17A8MXT2 336 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 FAM220BPB1ANY3 271 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 SLC16A6O15403 523 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 ERN1O75460 977 aaKnown RBP16.26■□□□□ 0.19
SQLE-201ENST00000265896 TGM1P22735 817 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 LHCGRP22888 699 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 WEE1P30291 646 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 TGM4P49221 684 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 NPRL3Q12980 569 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 SF3B4Q15427 424 aaKnown RBP eCLIP16.26■□□□□ 0.193e-7■■■■■ 26.8
SQLE-201ENST00000265896 XKR6Q5GH73 641 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 ATG9BQ674R7 924 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 PLEKHG7Q6ZR37 379 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CCDC103Q8IW40 242 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 NAGSQ8N159 534 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 USP7Q93009 1102 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 YIPF6Q96EC8 236 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 SLC32A1Q9H598 525 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 RMND5AQ9H871 391 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 TRIM39Q9HCM9 518 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 SLC10A3P09131 477 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CCDC159P0C7I6 412 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CD40LGP29965 261 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CRYBA2P53672 197 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 IRF8Q02556 426 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 MAD2L1Q13257 205 aaPredicted RBP16.26■□□□□ 0.19
SQLE-201ENST00000265896 COX20Q5RI15 118 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 KDM4DQ6B0I6 523 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CRTC1Q6UUV9 634 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 C11orf74Q86VG3 221 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 NRTNQ99748 197 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CENPOQ9BU64 300 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 RNF186Q9NXI6 227 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 FZD4Q9ULV1 537 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms