RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 AUHQ13825 339 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 MFSD13AQ14CX5 517 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 VWA5B1Q5TIE3 1220 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 IL4I1Q96RQ9 567 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 TLR10Q9BXR5 811 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 MOV10Q9HCE1 1003 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SQORQ9Y6N5 450 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PTPN2P17706 415 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 GSTM2P28161 218 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PPM1JQ5JR12 505 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 B3GNT5Q9BYG0 378 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 WDR26Q9H7D7 661 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 GOLGA2P5Q9HBQ8 144 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SLC39A1Q9NY26 324 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 NUFIP1Q9UHK0 495 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 MADDQ8WXG6 1647 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 CLN5O75503 358 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PSMA6P60900 246 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 GDF6Q6KF10 455 aaPredicted RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 MARCH9Q86YJ5 346 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SLC37A3Q8NCC5 494 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 TMIEQ8NEW7 156 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PURBQ96QR8 312 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 UTS2RQ9UKP6 389 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 TGFB1P01137 390 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 RGS6P49758 472 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 GPR157Q5UAW9 335 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 ERN2Q76MJ5 926 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 A0A1W2PPM1 405 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 BPGMP07738 259 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 BCL2A1Q16548 175 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PCDHGC4Q9Y5F7 938 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PXDNLA1KZ92 1463 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 TRAV6A0A075B6T7 132 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 A0A0A6YYH2 397 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 A6NJ64 397 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 OR4F21O95013 312 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 CD53P19397 219 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 LCN1P31025 176 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 DLSTP36957 453 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 ACTR1BP42025 376 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 AIF1P55008 147 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF773Q6PK81 442 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SLC51AQ86UW1 340 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SLC22A18Q96BI1 424 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 MMABQ96EY8 250 aaPredicted RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 MAN2C1Q9NTJ4 1040 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 ARL8BQ9NVJ2 186 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 ASB6Q9NWX5 421 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PCTPQ9UKL6 214 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 EDARQ9UNE0 448 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PLLPQ9Y342 182 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 DLDP09622 509 aaKnown RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SLC2A7Q6PXP3 512 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PAOXQ6QHF9 649 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 RCBTB1Q8NDN9 531 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 WACQ9BTA9 647 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 FBRSQ9HAH7 460 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 CLDND1Q9NY35 253 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 PCDHB14Q9Y5E9 798 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 DUXAA6NLW8 204 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SOX1O00570 391 aaPredicted RBP11.1□□□□□ -0.63
PTPN4-201ENST00000263708 SLC39A4Q6P5W5 647 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 CYB5D2Q8WUJ1 264 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 DUSP26Q9BV47 211 aa11.1□□□□□ -0.63
PTPN4-201ENST00000263708 CIB4A0PJX0 185 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF99A8MXY4 864 aaPredicted RBP11.09□□□□□ -0.63
PTPN4-201ENST00000263708 BMP8BP34820 402 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 LCP2Q13094 533 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 BMP8AQ7Z5Y6 402 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 TOR1AIP2Q8NFQ8 470 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 BEX2Q9BXY8 128 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 PTGES2Q9H7Z7 377 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 GTF2IRD1Q9UHL9 959 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 PIP5K1BO14986 540 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 MFSD11O43934 449 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 SCELO95171 688 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 KLK1P06870 262 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 CCND3P30281 292 aaPredicted RBP11.09□□□□□ -0.63
PTPN4-201ENST00000263708 SEC23BQ15437 767 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 CERS6Q6ZMG9 384 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 CPNE9Q8IYJ1 553 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF283Q8N7M2 679 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 C15orf40Q8WUR7 153 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 ART4Q93070 314 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 CCSER2Q9H7U1 834 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 ACOX3O15254 700 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 IFNA4P05014 189 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 RAC2P15153 192 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 TSHRP16473 764 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 GAD2Q05329 585 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF100Q8IYN0 542 aa11.09□□□□□ -0.63
PTPN4-201ENST00000263708 ARL14EPQ8N8R7 260 aaPredicted RBP11.09□□□□□ -0.63
PTPN4-201ENST00000263708 OR13C3Q8NGS6 347 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms