RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 NTRK1P04629 796 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 ATP1B2P14415 290 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 MAPK8P45983 427 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 CSNK1DP48730 415 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 SNRPD1P62314 119 aaKnown RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 IFITM3Q01628 133 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 IRF8Q02556 426 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 ABRQ12979 859 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 CCSMST1Q4G0I0 132 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 XKR6Q5GH73 641 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 CAPN13Q6MZZ7 669 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 LILRA3Q8N6C8 439 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 ZNF566Q969W8 418 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 LYSMD1Q96S90 227 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 DUSP21Q9H596 190 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 KIF17Q9P2E2 1029 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 LSM7Q9UK45 103 aaKnown RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 PNMA8BQ9ULN7 279 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 PMF1-BGLAPU3KQ54 211 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 SOBPA7XYQ1 873 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 ZBBXA8MT70 800 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 CLDN25C9JDP6 229 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 M0QX08 132 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 GABARAPO95166 117 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 ETHE1O95571 254 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 C8GP07360 202 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 PRPS1L1P21108 318 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 MAPK1P28482 360 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 DNAJA1P31689 397 aaKnown RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 CD97P48960 835 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 SPINT3P49223 89 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 CRYBA2P53672 197 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 OCA2Q04671 838 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 IL18R1Q13478 541 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 CLCA4Q14CN2 919 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 Q6ZVU0 165 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 TRIM74Q86UV6 250 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 TRIM73Q86UV7 250 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 ELMO1Q92556 727 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 MED8Q96G25 268 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 HMX1Q9NP08 348 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 MRPL17Q9NRX2 175 aaKnown RBP15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 KRT84Q9NSB2 600 aa15.84■□□□□ 0.13
TM9SF1-201ENST00000261789 IGLV3-16A0A075B6K0 115 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 TMEM247A6NEH6 219 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 GFYI3L273 518 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 M0R3G1 203 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 NUAK1O60285 661 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 ATP6V1G1O75348 118 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 ARHGEF15O94989 841 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 NADKO95544 446 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 OLFM2O95897 454 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 TNFRSF1BP20333 461 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 PRPH2P23942 346 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 PPP3CCP48454 512 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 CREMQ03060 361 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 MTAPQ13126 283 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 PAGE2BQ5JRK9 111 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 ASTLQ6HA08 431 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 C22orf39Q6P5X5 142 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 FAM217AQ8IXS0 508 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 FIBINQ8TAL6 211 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 ECHDC3Q96DC8 303 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 TMEM169Q96HH4 297 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 NEURL2Q9BR09 285 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 PALMDQ9NP74 551 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 THUMPD1Q9NXG2 353 aaKnown RBP15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 DAPK2Q9UIK4 370 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 TMED5Q9Y3A6 229 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 FAM20BO75063 409 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 SEMG1P04279 462 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 LCKP06239 509 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 JUPP14923 745 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 PORP16435 677 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 GPX2P18283 190 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 ACVR2AP27037 513 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 KRT20P35900 424 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 HNMTP50135 292 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 FOXD4Q12950 439 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 AHSA2Q719I0 299 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 LMNTD1Q8N9Z9 388 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 SETD9Q8NE22 299 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 ALPK1Q96QP1 1244 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 GABARAPL1Q9H0R8 117 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 TPT1P8Q9HAU6 139 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 AMBNQ9NP70 447 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 VPS29Q9UBQ0 182 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 NDRG4Q9ULP0 352 aaKnown RBP15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 TPRKBQ9Y3C4 175 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 PCDHGB1Q9Y5G3 927 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 MICAL3Q7RTP6 2002 aa15.83■□□□□ 0.12
TM9SF1-201ENST00000261789 A0A1W2PRU2 124 aa15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 PCDHGA12O60330 932 aa15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 ABCB1P08183 1280 aaPredicted RBP15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 IMPDH2P12268 514 aa15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 JUNDP17535 347 aa15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 CYP2A7P20853 494 aa15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 FPR1P21462 350 aa15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 HPCAL1P37235 193 aa15.82■□□□□ 0.12
TM9SF1-201ENST00000261789 CBX3Q13185 183 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms