RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 DSG2Q14126 1118 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 GARNL3Q5VVW2 1013 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 ACTRT1Q8TDG2 376 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 VPS50Q96JG6 964 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 AARSD1Q9BTE6 412 aaKnown RBP16.06■□□□□ 0.16
CGREF1-201ENST00000260595 CCDC68Q9H2F9 335 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 ZNF160Q9HCG1 818 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 ERRFI1Q9UJM3 462 aaPredicted RBP16.06■□□□□ 0.16
CGREF1-201ENST00000260595 CDC14AQ9UNH5 594 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 MAD1L1Q9Y6D9 718 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 COMMD10Q9Y6G5 202 aa16.06■□□□□ 0.16
CGREF1-201ENST00000260595 PGRMC1O00264 195 aaKnown RBP16.05■□□□□ 0.16
CGREF1-201ENST00000260595 FFAR3O14843 346 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 HAT1O14929 419 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 GPR42O15529 346 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 P2RX6O15547 441 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 ZBTB14O43829 449 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 KLHL18O94889 574 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 DDAH2O95865 285 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 SYF2O95926 243 aaKnown RBP16.05■□□□□ 0.16
CGREF1-201ENST00000260595 ACPPP15309 386 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 IMPA1P29218 277 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 FNTAP49354 379 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 C4orf17Q53FE4 359 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 HSP90AA5PQ58FG0 334 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 RNASEH2BQ5TBB1 312 aaKnown RBP16.05■□□□□ 0.16
CGREF1-201ENST00000260595 PIWIL4Q7Z3Z4 852 aaKnown RBP16.05■□□□□ 0.16
CGREF1-201ENST00000260595 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 CPNE9Q8IYJ1 553 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 DNAJB14Q8TBM8 379 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 CALML6Q8TD86 181 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 PSMF1Q92530 271 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 LMF1Q96S06 567 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 OSBPL9Q96SU4 736 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 NAP1L3Q99457 506 aaPredicted RBP16.05■□□□□ 0.16
CGREF1-201ENST00000260595 TGIF2Q9GZN2 237 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 UTP6Q9NYH9 597 aaKnown RBP16.05■□□□□ 0.16
CGREF1-201ENST00000260595 TRPC4Q9UBN4 977 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 PCYOX1Q9UHG3 505 aa16.05■□□□□ 0.16
CGREF1-201ENST00000260595 ANKUB1A6NFN9 424 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 IDSB3KWA1 339 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 EIF3FO00303 357 aaPredicted RBP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 MAP2K7O14733 419 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 NRDCO43847 1150 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 COX6A1P12074 109 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 TSFMP43897 325 aaKnown RBP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 EFNA3P52797 238 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 EMP2P54851 167 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 MFAP5Q13361 173 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 IRAK1BP1Q5VVH5 260 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 ISLR2Q6UXK2 745 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 UBE2R2Q712K3 238 aaPredicted RBP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 PLD3Q8IV08 490 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 SLC35F6Q8N357 371 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 MMABQ96EY8 250 aaPredicted RBP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 IARS2Q9NSE4 1012 aaKnown RBP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 ABCF3Q9NUQ8 709 aa16.04■□□□□ 0.16
CGREF1-201ENST00000260595 MRPS2Q9Y399 296 aaKnown RBP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 RP1L1Q8IWN7 2480 aaPredicted RBP16.04■□□□□ 0.16
CGREF1-201ENST00000260595 ICE1Q9Y2F5 2266 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 A0A0A6YYC8 382 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 H7BY64 318 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 I3L1I5 382 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 TXNDC9O14530 226 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 PRPF4O43172 522 aaKnown RBP eCLIP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 LDLRP01130 860 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 GABRB3P28472 473 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 FAM53BQ14153 422 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 ZNF169Q14929 603 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 SYT16Q17RD7 645 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 B3GNTL1Q67FW5 361 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 LINC00696Q6ZRV3 163 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 NDUFAF7Q7L592 441 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 KCNMB4Q86W47 210 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 C2CD4AQ8NCU7 369 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 CATSPER1Q8NEC5 780 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 RERGQ96A58 199 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 PRAP1Q96NZ9 151 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 FAM167BQ9BTA0 163 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 DRC3Q9H069 523 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 EPS8L2Q9H6S3 715 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 MKKSQ9NPJ1 570 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 C14orf105Q9NVL8 296 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 ADAMTS6Q9UKP5 1117 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 DOCK10Q96BY6 2186 aa16.03■□□□□ 0.16
CGREF1-201ENST00000260595 UTP20O75691 2785 aaKnown RBP16.03■□□□□ 0.16
CGREF1-201ENST00000260595 SPTAN1Q13813 2472 aaKnown RBP16.02■□□□□ 0.16
CGREF1-201ENST00000260595 LOC102723996A0A087X1L8 192 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 IGHV1-45A0A0A0MS14 117 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 NSG1A0A0A6YYJ2 146 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 PRR35P0CG20 571 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 PGAM1P18669 254 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 SOX11P35716 441 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 CRYMQ14894 314 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 TLR1Q15399 786 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 MSS51Q4VC12 460 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 THEMIS2Q5TEJ8 643 aa16.02■□□□□ 0.16
CGREF1-201ENST00000260595 TMEM205Q6UW68 189 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms