RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 KIAA1614Q5VZ46 1190 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 LRRC69Q6ZNQ3 347 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 CDHR3Q6ZTQ4 885 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 LRRC56Q8IYG6 542 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 OR2L3Q8NG85 312 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 SLC44A1Q8WWI5 657 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 FCRL4Q96PJ5 515 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 MIPEPQ99797 713 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 SPRY4Q9C004 299 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 DERL2Q9GZP9 239 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 FANCEQ9HB96 536 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 INTS7Q9NVH2 962 aaKnown RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 STOX2Q9P2F5 926 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 IKZF3Q9UKT9 509 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 KLHL20Q9Y2M5 609 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 IKBKGQ9Y6K9 419 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 ANKRD11Q6UB99 2663 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 INHBAP08476 426 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 CCDC166P0CW27 439 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 LIPCP11150 499 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 CRABP2P29373 138 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 AP1S2P56377 157 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 SBSNQ6UWP8 590 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 RAPH1Q70E73 1250 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 CMC1Q7Z7K0 106 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 DTX1Q86Y01 620 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 OR8K5Q8NH50 307 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 UTP4Q969X6 686 aaKnown RBP16.11■□□□□ 0.17
SDCBP-201ENST00000260130 ZUFSPQ96AP4 578 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 ACAT2Q9BWD1 397 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 ARL15Q9NXU5 204 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 HAO1Q9UJM8 370 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 HMX2A2RU54 273 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 CDC7O00311 574 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 STK17BO94768 372 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 BMPR2Q13873 1038 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 FIGLAQ6QHK4 219 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 MBOAT1Q6ZNC8 495 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 UBXN10Q96LJ8 280 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 PAFAH2Q99487 392 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 DHRS4Q9BTZ2 278 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 SAR1AQ9NR31 198 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 PILRAQ9UKJ1 303 aa16.11■□□□□ 0.17
SDCBP-201ENST00000260130 TMEM184BQ9Y519 407 aaPredicted RBP16.11■□□□□ 0.17
SDCBP-201ENST00000260130 URB1O60287 2271 aaKnown RBP16.1■□□□□ 0.17
SDCBP-201ENST00000260130 TARM1B6A8C7 271 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 KLK10O43240 276 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 CMPK1P30085 196 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 GRIA3P42263 894 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 CLN3Q13286 438 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 TGIF1Q15583 401 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 PPP1R3AQ16821 1122 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 PWWP2BQ6NUJ5 590 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 AGTRAPQ6RW13 159 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 SPATA6LQ8N4H0 392 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 ULBP3Q9BZM4 244 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 TAC3Q9UHF0 121 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 ZFP69BQ9UJL9 534 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 SERTAD3Q9UJW9 196 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 KLK4Q9Y5K2 254 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 EPG5Q9HCE0 2579 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 NPEPPSL1A6NEC2 478 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 TMEM150CB9EJG8 249 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 TIAF1O95411 115 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 GUCA1CO95843 209 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 SLC35E2BP0CK96 405 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 ZNF28P17035 718 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 SERPINB9P50453 376 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 PRDX1Q06830 199 aaKnown RBP16.1■□□□□ 0.17
SDCBP-201ENST00000260130 TSNQ15631 228 aaKnown RBP16.1■□□□□ 0.17
SDCBP-201ENST00000260130 THEMIS2Q5TEJ8 643 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 FCRL6Q6DN72 434 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 ADAMTSL2Q86TH1 951 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 SPACA3Q8IXA5 215 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 VPS11Q9H270 941 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 UTP6Q9NYH9 597 aaKnown RBP16.1■□□□□ 0.17
SDCBP-201ENST00000260130 USP24Q9UPU5 2620 aa16.1■□□□□ 0.17
SDCBP-201ENST00000260130 CFAP47Q6ZTR5 3102 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 CD1DP15813 335 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 GABRA4P48169 554 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ATP6V0D1P61421 351 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 YBX1P67809 324 aaKnown RBP16.09■□□□□ 0.17
SDCBP-201ENST00000260130 CSHL1Q14406 222 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 WASHC2DQ5SRD0 308 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 OR1L3Q8NH93 324 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ATL1Q8WXF7 558 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 TUBB6Q9BUF5 446 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 UNKQ9C0B0 810 aaKnown RBP16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ATG10Q9H0Y0 220 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 RNPEPL1Q9HAU8 725 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 MRPS30Q9NP92 439 aaKnown RBP16.09■□□□□ 0.17
SDCBP-201ENST00000260130 CCDC177Q9NQR7 707 aaPredicted RBP16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ZNF180Q9UJW8 692 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ACOT9Q9Y305 439 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 OARD1Q9Y530 152 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 HCRTR1O43613 425 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 KRT38O76015 456 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 CCNDBP1O95273 360 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 DLGAP3O95886 979 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms