RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 GPR155Q7Z3F1 870 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 TSPYL5Q86VY4 417 aaPredicted RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 HORMAD1Q86X24 394 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 OR8J2Q8NGG1 315 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 HSH2DQ96JZ2 352 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 DPH2Q9BQC3 489 aaPredicted RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 HMX1Q9NP08 348 aaPredicted RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 AKIP1Q9NQ31 210 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 NECTIN3Q9NQS3 549 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 MRPL17Q9NRX2 175 aaKnown RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 SELENONQ9NZV5 590 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 SAMHD1Q9Y3Z3 626 aaKnown RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 M0R3G1 203 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 COX7A2P14406 83 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 CD22P20273 847 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 MASP1P48740 699 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 IRF8Q02556 426 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 CLCA4Q14CN2 919 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 SMN1Q16637 294 aaKnown RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 LIPJQ5W064 366 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 ZDHHC20Q5W0Z9 365 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 CLECL1Q8IZS7 167 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 ZNF540Q8NDQ6 660 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 MAGEB10Q96LZ2 347 aaPredicted RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 BBS2Q9BXC9 721 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 WDR12Q9GZL7 423 aaKnown RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 BRD9Q9H8M2 597 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 FAM120CQ9NX05 1096 aaKnown RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 VPS29Q9UBQ0 182 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 CD84Q9UIB8 345 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 KIAA1671Q9BY89 1806 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 DENND4CQ5VZ89 1909 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 TOR1BO14657 336 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 YY2O15391 372 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 MTX2O75431 263 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 MT-ND2P03891 347 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 INHAP05111 366 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 CKMP06732 381 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 CCL23P55773 120 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 LSM3P62310 102 aaKnown RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 CSTF3Q12996 717 aaKnown RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 MAD2L1BPQ15013 274 aaPredicted RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 CYP2A13Q16696 494 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 LRRC73Q5JTD7 316 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 SPOUT1Q5T280 376 aaKnown RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 C22orf39Q6P5X5 142 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 CCDC81Q6ZN84 652 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 GAREM2Q75VX8 874 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 NDNFQ8TB73 568 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 CD99L2Q8TCZ2 262 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 PXYLP1Q8TE99 480 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 AUTS2Q8WXX7 1259 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 GLMNQ92990 594 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 MYOCQ99972 504 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 RHNO1Q9BSD3 238 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 CPEB1Q9BZB8 566 aaKnown RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 ASPSCR1Q9BZE9 553 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 ARMC7Q9H6L4 198 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 KRT84Q9NSB2 600 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 KPNA4O00629 521 aaPredicted RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 RGS10O43665 173 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 LAMP1P11279 417 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 GABRR2P28476 465 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 KIAA1614Q5VZ46 1190 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 PDE12Q6L8Q7 609 aaKnown RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 DPY19L3Q6ZPD9 716 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 DEFB128Q7Z7B8 93 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 P2RY8Q86VZ1 359 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 ATG16L2Q8NAA4 619 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 WDR20Q8TBZ3 569 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 ZFP90Q8TF47 636 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 TMEM169Q96HH4 297 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 LMLNQ96KR4 655 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 ZNF300Q96RE9 604 aaPredicted RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 MTERF1Q99551 399 aaKnown RBP14.75□□□□□ -0.05
DDX56-201ENST00000258772 ZDHHC6Q9H6R6 413 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 REEP1Q9H902 201 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 B4GALT6Q9UBX8 382 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 HS3ST2Q9Y278 367 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 BTBD3Q9Y2F9 522 aa14.75□□□□□ -0.05
DDX56-201ENST00000258772 KPNA5O15131 536 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 UGDHO60701 494 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 CDH3P22223 829 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 PSMB9P28065 219 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 ST13P50502 369 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 VBP1P61758 197 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 ZNF33BQ06732 778 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 VEZF1Q14119 521 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 SF1Q15637 639 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 TRIM16LQ309B1 348 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 IQCCQ4KMZ1 466 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 XKR6Q5GH73 641 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 CCDC71Q8IV32 467 aaPredicted RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 CMTM8Q8IZV2 173 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 SYNPOQ8N3V7 929 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 CPA6Q8N4T0 437 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 ZBTB8BQ8NAP8 495 aaPredicted RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 S100ZQ8WXG8 99 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 UBE2FQ969M7 185 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 NEURL2Q9BR09 285 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms