RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ETV3P41162 512 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 BLVRAP53004 296 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 PLA2G16P53816 162 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 SPIBQ01892 262 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 PTSQ03393 145 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 MZT1Q08AG7 82 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 FSTL4Q6MZW2 842 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 GCNT7Q6ZNI0 430 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 FGD2Q7Z6J4 655 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 OR2T12Q8NG77 320 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 ZFYVE21Q9BQ24 234 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 CD244Q9BZW8 370 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 DCLRE1BQ9H816 532 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 FHP07954 510 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 IL7RP16871 459 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 PSME3P61289 254 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 C16orf46Q6P387 395 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 ADAMTSL4Q6UY14 1074 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 IKBIPQ70UQ0 350 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 RHEBL1Q8TAI7 183 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 NACC2Q96BF6 587 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 CNDP2Q96KP4 475 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 UNKQ9C0B0 810 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 REXO4Q9GZR2 422 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 COX4I1P13073 169 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 HOXD12P35452 270 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 STAT5AP42229 794 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 AGTR2P50052 363 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 KPNB1Q14974 876 aaKnown RBP13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 TANGO2Q6ICL3 276 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 MTDHQ86UE4 582 aaKnown RBP13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 IQCHQ86VS3 1027 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 HIPK1Q86Z02 1210 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 CILP2Q8IUL8 1156 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 ABCG8Q9H221 673 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 BTRCQ9Y297 605 aa13.02□□□□□ -0.32
PRPF38A-201ENST00000257181 FTCDNL1E5RQL4 147 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 TLR4O00206 839 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 SH3BGRLO75368 114 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 MOGSQ13724 837 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 ASB15Q8WXK1 588 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 LTB4R2Q9NPC1 389 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 ASB6Q9NWX5 421 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 SPO11Q9Y5K1 396 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 UGT1A9O60656 530 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 APOC1P02654 83 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 UGT1A6P19224 532 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 MRPL28Q13084 256 aaKnown RBP13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 SLC36A3Q495N2 470 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 PNCKQ6P2M8 343 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 FIGLAQ6QHK4 219 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 PDZD3Q86UT5 571 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 CADM2Q8N3J6 435 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 MFSD3Q96ES6 412 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 UGT1A7Q9HAW7 530 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 UGT1A10Q9HAW8 530 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 UGT1A8Q9HAW9 530 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 COL5A3P25940 1745 aaPredicted RBP13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 IL4RP24394 825 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 LCTLQ6UWM7 567 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 TIFABQ6ZNK6 161 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 VN1R5Q7Z5H4 357 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF366Q8N895 744 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 BBS10Q8TAM1 723 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 RNFT2Q96EX2 444 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 UTS2RQ9UKP6 389 aa13.02□□□□□ -0.33
PRPF38A-201ENST00000257181 UGT2B11O75310 529 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 CAPN1P07384 714 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 CD48P09326 243 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 DMPKQ09013 629 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 KCNJ11Q14654 390 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF630Q2M218 657 aaPredicted RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 IL23RQ5VWK5 629 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 FAM91A1Q658Y4 838 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 DEF8Q6ZN54 512 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 C10orf107Q8IVU9 208 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 ZUFSPQ96AP4 578 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 GPATCH1Q9BRR8 931 aaKnown RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 CAB39Q9Y376 341 aaPredicted RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 A0A0D9SEW6 157 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 H0YJX3 145 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 TRAPPC6AO75865 159 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 HMGN1P05114 100 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 TYRP1P17643 537 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 VSX2P58304 361 aaPredicted RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 DCDC1P59894 354 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 MSANTD1Q6ZTZ1 278 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 C6orf120Q7Z4R8 191 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 OR6Y1Q8NGX8 325 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 RERGLQ9H628 205 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 EPHX3Q9H6B9 360 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 TMEM45AQ9NWC5 275 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 SPEF1Q9Y4P9 236 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 ANKRD28O15084 1053 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 PRAMEF12O95522 483 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 PGCP20142 388 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF84P51523 738 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 MYBPC1Q00872 1141 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms