RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SPATA31C2B4DYI2 1134 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 SULT1C2O00338 296 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 TXNL1O43396 289 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 RNASEH2AO75792 299 aaKnown RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PCDH8O95206 1070 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 OPRL1P41146 370 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 RFTN1Q14699 578 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC25A52Q3SY17 297 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PPP1R26Q5T8A7 1209 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 FIBCD1Q8N539 461 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 SAMD12Q8N8I0 201 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 SOCS4Q8WXH5 440 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 TTLL2Q9BWV7 592 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 CACNG6Q9BXT2 260 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 NLKQ9UBE8 527 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 LMO7Q8WWI1 1683 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PEX10O60683 326 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PEX14O75381 377 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PFKPQ01813 784 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 ST3GAL4Q11206 333 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 NTRK2Q16620 822 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 RABL3Q5HYI8 236 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 CXCL17Q6UXB2 119 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC44A3Q8N4M1 653 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PDGFDQ9GZP0 370 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 IKZF4Q9H2S9 585 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR2S2Q9NQN1 319 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 THUMPD1Q9NXG2 353 aaKnown RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PRKYO43930 277 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 UPK1BO75841 260 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 C22orf31O95567 290 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 IFNA10P01566 189 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 IFNA4P05014 189 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 PROS1P07225 676 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 ITPKAP23677 461 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 MAPK9P45984 424 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF132P52740 706 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 NKX6-1P78426 367 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 TAGLNQ01995 201 aaKnown RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 MPPE1Q53F39 396 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 NAT8LQ8N9F0 302 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC43A3Q8NBI5 491 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 RNF121Q9H920 327 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 CA5BQ9Y2D0 317 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 YARS2Q9Y2Z4 477 aaKnown RBP12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 MYPNQ86TC9 1320 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.36
PCDHGA3-201ENST00000253812 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 BDNFP23560 247 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 CD6P30203 668 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ADRA1BP35368 520 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ATXN1P54253 815 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 TAS2R43P59537 309 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 AGAP6Q5VW22 663 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 KCTD9Q7L273 389 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 KIAA0319LQ8IZA0 1049 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 GTPBP8Q8N3Z3 284 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 SETD6Q8TBK2 473 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 STYXQ8WUJ0 223 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ARL11Q969Q4 196 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 AGAP4Q96P64 663 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ELOA3DA6NLF2 546 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 MT-ND2P03891 347 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 MAP3K8P41279 467 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC1A2P43004 574 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ABHD18Q0P651 414 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 NDUFA9Q16795 377 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ELOA3BQ3SY89 546 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 FAM46DQ8NEK8 389 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 CCDC54Q8NEL0 328 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ELOA3Q8NG57 546 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 TBX5Q99593 518 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 NUFIP1Q9UHK0 495 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 EIF2B4Q9UI10 523 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 CLIC1O00299 241 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 HSPA12AO43301 675 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 PNLIPRP1P54315 467 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 HERVK_113P63132 956 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 DSG2Q14126 1118 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 PLEKHN1Q494U1 663 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 LRRC37A5PQ49AS3 106 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 SSX9Q7RTT3 188 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 SPATA22Q8NHS9 363 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 AUTS2Q8WXX7 1259 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 MGLLQ99685 303 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 DUSP26Q9BV47 211 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ERVK-6Q9BXR3 956 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF436Q9C0F3 470 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 CDT1Q9H211 546 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 GFOD1Q9NXC2 390 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 MRPL42Q9Y6G3 142 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 C2orf92A0A1B0GVN3 265 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 H3BMQ9 156 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 FLRT2O43155 660 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 KIAA0513O60268 411 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 RPLP2P05387 115 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms