RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FAM60AQ9NP50 221 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 STK38LQ9Y2H1 464 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 SNRNP200O75643 2136 aaKnown RBP13.54□□□□□ -0.24
VPS25-201ENST00000253794 A0A1W2PNU3 283 aaPredicted RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 TRBC2A0A5B9 178 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 A8MU76 341 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 H3BMH7 237 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 H3BQF6 201 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 H7BY64 318 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 OR7A17O14581 309 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 CLGNO14967 610 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 MAP3K7O43318 606 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 CTSVO60911 334 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 C1GALT1C1LP0DN25 315 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 SERPINB5P36952 375 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 MLLT3P42568 568 aaPredicted RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 SEPHS1P49903 392 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 MC2RQ01718 297 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 ACY1Q03154 408 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 GALNT1Q10472 559 aaPredicted RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 TRAF3Q13114 568 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 CAMK2BQ13554 666 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 GGTA1PQ4G0N0 100 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 ZC3H12BQ5HYM0 836 aaKnown RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 CATSPEREQ5SY80 951 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 LIPJQ5W064 366 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 FBXO42Q6P3S6 717 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 CYB5D1Q6P9G0 228 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 RAB11FIP2Q7L804 512 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 BPHLQ86WA6 291 aaPredicted RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 CHCHD4Q8N4Q1 142 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 SNX31Q8N9S9 440 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 WDR36Q8NI36 951 aaKnown RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 MAGEB10Q96LZ2 347 aaPredicted RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 PRAP1Q96NZ9 151 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 NSUN5Q96P11 429 aaKnown RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 ZNF382Q96SR6 550 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 ZFYVE21Q9BQ24 234 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 GATA5Q9BWX5 397 aaPredicted RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 IPPKQ9H8X2 491 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 FBXO8Q9NRD0 319 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 SOHLH2Q9NX45 425 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 NKIRAS1Q9NYS0 192 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 AKAP7Q9P0M2 348 aaPredicted RBP13.53□□□□□ -0.24
VPS25-201ENST00000253794 KLHL20Q9Y2M5 609 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 TSC22D4Q9Y3Q8 395 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 PCDHGA8Q9Y5G5 932 aa13.53□□□□□ -0.24
VPS25-201ENST00000253794 PTPRBP23467 1997 aa13.52□□□□□ -0.24
VPS25-201ENST00000253794 PCM1Q15154 2024 aa13.52□□□□□ -0.24
VPS25-201ENST00000253794 HAT1O14929 419 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 PLD2O14939 933 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 NRP2O60462 931 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 NPHS1O60500 1241 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 SRPX2O60687 465 aaPredicted RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 H2AFYO75367 372 aaKnown RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 SUPT7LO94864 414 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 MLYCDO95822 493 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 EBLN1P0CF75 366 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 FGF5P12034 268 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 FOLR1P15328 257 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 CD22P20273 847 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 CXCR2P25025 360 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 GSTM2P28161 218 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 HNF4AP41235 474 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 ARL4DP49703 201 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 NAGLUP54802 743 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 RPS15AP62244 130 aaKnown RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 PPP2R2AP63151 447 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 CLCQ05315 142 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 LCP2Q13094 533 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 CHIT1Q13231 466 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 LAPTM5Q13571 262 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 DOC2AQ14183 400 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 IL11RAQ14626 422 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 HSP90B2PQ58FF3 399 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 GRHL2Q6ISB3 625 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 DGLUCYQ7Z3D6 616 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 TMPRSS11BQ86T26 416 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 SREK1Q8WXA9 508 aaKnown RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 ZNF501Q96CX3 271 aaPredicted RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 PRR11Q96HE9 360 aaPredicted RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 OR2A5Q96R48 311 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 AIF1LQ9BQI0 150 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 MECRQ9BV79 373 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 SPNS1Q9H2V7 528 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 NOL11Q9H8H0 719 aaKnown RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 ABCF3Q9NUQ8 709 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 GEMIN8Q9NWZ8 242 aaKnown RBP13.52□□□□□ -0.25
VPS25-201ENST00000253794 PLCL2Q9UPR0 1127 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 LOXL2Q9Y4K0 774 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 ANGPTL3Q9Y5C1 460 aa13.52□□□□□ -0.25
VPS25-201ENST00000253794 KNTC1P50748 2209 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 HEATR5BQ9P2D3 2071 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 H0YIV9 168 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 OTCP00480 354 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 VARSP26640 1264 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms