RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 IL17RDQ8NFM7 739 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 AUTS2Q8WXX7 1259 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 TBC1D20Q96BZ9 403 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 CAPNS2Q96L46 248 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 PPP3R2Q96LZ3 170 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 NXF2Q9GZY0 626 aaKnown RBP18.38■□□□□ 0.53
SNX4-201ENST00000251775 QPCTLQ9NXS2 382 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 M0R082 166 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 CCNKO75909 580 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 SLC25A14O95258 325 aaPredicted RBP18.37■□□□□ 0.53
SNX4-201ENST00000251775 DBTP11182 482 aaKnown RBP18.37■□□□□ 0.53
SNX4-201ENST00000251775 NFATC2Q13469 925 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 GTF2H3Q13889 308 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 CDKN3Q16667 212 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 TSPYL5Q86VY4 417 aaPredicted RBP18.37■□□□□ 0.53
SNX4-201ENST00000251775 SYTL1Q8IYJ3 562 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 SLAIN1Q8ND83 568 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 CDADC1Q9BWV3 514 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 DPY30Q9C005 99 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 ZMYM5Q9UJ78 669 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 CLEC4EQ9ULY5 219 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 EIF3LQ9Y262 564 aaKnown RBP18.37■□□□□ 0.53
SNX4-201ENST00000251775 A8MX80 341 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 TRBC1P01850 177 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 GADD45AP24522 165 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 HNF1BP35680 557 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 ZNF45Q02386 682 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
SNX4-201ENST00000251775 UTS2BQ765I0 119 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 RBFAQ8N0V3 343 aa18.37■□□□□ 0.53
SNX4-201ENST00000251775 IPCEF1Q8WWN9 437 aaPredicted RBP18.37■□□□□ 0.53
SNX4-201ENST00000251775 FAM120BQ96EK7 910 aaKnown RBP18.37■□□□□ 0.53
SNX4-201ENST00000251775 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX4-201ENST00000251775 GOLGA8CPA6NN73 597 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 AREL1O15033 823 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 HOXC11O43248 304 aaPredicted RBP18.36■□□□□ 0.53
SNX4-201ENST00000251775 IDH3BO43837 385 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 SEC22BO75396 215 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 GLUD1P00367 558 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 MYCP01106 439 aaPredicted RBP18.36■□□□□ 0.53
SNX4-201ENST00000251775 IL6P05231 212 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 ALOX12P18054 663 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 GDF5P43026 501 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 PRKCDQ05655 676 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 BCL2L1Q07817 233 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 OR2T5Q6IEZ7 315 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 MILR1Q7Z6M3 343 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 NLGN4XQ8N0W4 816 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 OR2T29Q8NH02 315 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 APH1BQ8WW43 257 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 OR52E6Q96RD3 313 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 CPPED1Q9BRF8 314 aaPredicted RBP18.36■□□□□ 0.53
SNX4-201ENST00000251775 CLMPQ9H6B4 373 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 IL21Q9HBE4 155 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 RNF6Q9Y252 685 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 AP3M1Q9Y2T2 418 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 A3GALT2U3KPV4 340 aa18.36■□□□□ 0.53
SNX4-201ENST00000251775 FAM172BPA6NC97 362 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 PCDHGA12O60330 932 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 OTCP00480 354 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 MYCLP1P12525 358 aaPredicted RBP18.35■□□□□ 0.53
SNX4-201ENST00000251775 BPIP17213 487 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 CXCR2P25025 360 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 PROX2Q3B8N5 592 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 AGAP6Q5VW22 663 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 TMCO2Q7Z6W1 182 aaPredicted RBP18.35■□□□□ 0.53
SNX4-201ENST00000251775 HEATR4Q86WZ0 1026 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 ZSWIM9Q86XI8 627 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 LIX1Q8N485 282 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 PAF1Q8N7H5 531 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 GLB1L3Q8NCI6 653 aaPredicted RBP18.35■□□□□ 0.53
SNX4-201ENST00000251775 AGAP4Q96P64 663 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 APOL5Q9BWW9 433 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 FAM126AQ9BYI3 521 aaPredicted RBP18.35■□□□□ 0.53
SNX4-201ENST00000251775 OR2B2Q9GZK3 357 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 ZFP14Q9HCL3 533 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 OARD1Q9Y530 152 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 N6AMT1Q9Y5N5 214 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 TRBV5-4A0A0C4DH59 114 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 MYO1GB0I1T2 1018 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 HOXB6P17509 224 aaKnown RBP18.35■□□□□ 0.53
SNX4-201ENST00000251775 PIK3CGP48736 1102 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 ATN1P54259 1190 aaPredicted RBP18.35■□□□□ 0.53
SNX4-201ENST00000251775 SEMG2Q02383 582 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 CREMQ03060 361 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 RAB33AQ14088 237 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 KIAA1614Q5VZ46 1190 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 RETSATQ6NUM9 610 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 SUSD1Q6UWL2 747 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 C2orf49Q9BVC5 232 aaPredicted RBP18.35■□□□□ 0.53
SNX4-201ENST00000251775 TNKS2Q9H2K2 1166 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 FBXL12Q9NXK8 326 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 INSL5Q9Y5Q6 135 aa18.35■□□□□ 0.53
SNX4-201ENST00000251775 PER2O15055 1255 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 KMOO15229 486 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 SSX4O60224 188 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 DIRAS1O95057 198 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 OLFM2O95897 454 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 KRT8P05787 483 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 ITGALP20701 1170 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms