RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 JAK1P23458 1154 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 CXCR2P25025 360 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 GSTM2P28161 218 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PBLDP30039 288 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-201ENST00000238688 RABIFP47224 123 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PHEXP78562 749 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 IRF8Q02556 426 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PRKG2Q13237 762 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 RCAN2Q14206 197 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 NFE2L1Q14494 772 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 NR6A1Q15406 480 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 CYP2A13Q16696 494 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 IMPG1Q17R60 797 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PYCR3Q53H96 274 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 CACHD1Q5VU97 1274 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 FRG2Q64ET8 278 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 TMEM198Q66K66 360 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 LCTLQ6UWM7 567 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 RINLQ6ZS11 566 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 Q6ZSR9 355 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 ZFAND4Q86XD8 727 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 ZFPM2Q8WW38 1151 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 UTP4Q969X6 686 aaKnown RBP12.76□□□□□ -0.37
SLIRP-201ENST00000238688 CMTM7Q96FZ5 175 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 FRG2BQ96QU4 278 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 OR2M4Q96R27 311 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 KCNA7Q96RP8 456 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PKP4Q99569 1192 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 GID8Q9NWU2 228 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 C1orf109Q9NX04 203 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 TRNAU1APQ9NX07 287 aaKnown RBP12.76□□□□□ -0.37
SLIRP-201ENST00000238688 SLC22A14Q9Y267 594 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 ASF1AQ9Y294 204 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 AP3M1Q9Y2T2 418 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 DYRK1BQ9Y463 629 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 TIMM22Q9Y584 194 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 LRP4O75096 1905 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 DMXL2Q8TDJ6 3036 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 C15orf38-AP3S2A0A0A6YYH1 394 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 A0A1B0GTL3 188 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 FAM234BA2RU67 622 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 PCDHGA12O60330 932 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 NRP2O60462 931 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
SLIRP-201ENST00000238688 EPORP19235 508 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 HRH2P25021 359 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 PDHA2P29803 388 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 GDF5P43026 501 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 CLNS1AP54105 237 aaKnown RBP12.75□□□□□ -0.37
SLIRP-201ENST00000238688 KCNK10P57789 538 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 NAE1Q13564 534 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 CUL3Q13618 768 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 TEAD4Q15561 434 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 HIST2H2ACQ16777 129 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-201ENST00000238688 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 MMEL1Q495T6 779 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 AGKQ53H12 422 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 PRAMEF14Q5SWL7 426 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ATG9BQ674R7 924 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 HIST2H2AA3Q6FI13 130 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 BLOC1S3Q6QNY0 202 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 XKR5Q6UX68 686 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 MBOAT1Q6ZNC8 495 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 MSANTD1Q6ZTZ1 278 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ARPINQ7Z6K5 226 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 SYTL1Q8IYJ3 562 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 FNDC5Q8NAU1 212 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 FAM13CQ8NE31 585 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ZNF480Q8WV37 535 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ESAMQ96AP7 390 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 PPP1R36Q96LQ0 422 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ZBTB18Q99592 522 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 HOPXQ9BPY8 73 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-201ENST00000238688 LGR4Q9BXB1 951 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 KLQ9UEF7 1012 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ZNHIT2Q9UHR6 403 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 TSR3Q9UJK0 312 aaKnown RBP12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ZNF490Q9ULM2 529 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-201ENST00000238688 BTRCQ9Y297 605 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 TMEM98Q9Y2Y6 226 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 CCL27Q9Y4X3 112 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 DGKBQ9Y6T7 804 aa12.75□□□□□ -0.37
SLIRP-201ENST00000238688 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-201ENST00000238688 FAM208BQ5VWN6 2430 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ATP6AP2A0A1C7CYW4 349 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 PRSS38A1L453 326 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 E7ENX8 843 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 FOXE1O00358 373 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ANGPT2O15123 496 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 FLRT2O43155 660 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 DNAJA2O60884 412 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 SLC22A3O75751 556 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ATP6AP2O75787 350 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 SLC2A4P14672 509 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ITGAXP20702 1163 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 PIK3CBP42338 1070 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 HALP42357 657 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 NUDT2P50583 147 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 HNRNPFP52597 415 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms