RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SGK2Q9HBY8 427 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 IFT80Q9P2H3 777 aaPredicted RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 ERVK-11Q9UQG0 969 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 MRPS23Q9Y3D9 190 aaKnown RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 MTCL1Q9Y4B5 1905 aaKnown RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 NOTCH4Q99466 2003 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 H3BM21 787 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 FPGTO14772 594 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 KCNK5O95279 499 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ITGB7P26010 798 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 PDHA2P29803 388 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 IST1P53990 364 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 RAE1P78406 368 aaKnown RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 SLC14A1Q13336 389 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 PLCL1Q15111 1095 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 VMACQ2NL98 169 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 RBM48Q5RL73 367 aaKnown RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 GALNT18Q6P9A2 607 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 SLCO4C1Q6ZQN7 724 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 C12orf40Q86WS4 652 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 C7orf61Q8IZ16 206 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 VN1R2Q8NFZ6 395 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 OR7A2PQ8NGA2 310 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF420Q8TAQ5 688 aaPredicted RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ING5Q8WYH8 240 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 GFM2Q969S9 779 aaKnown RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 MBOAT4Q96T53 435 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 DOK1Q99704 481 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 EBPLQ9BY08 206 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 DPP7Q9UHL4 492 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 BTNL2Q9UIR0 455 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 MAGEB17A8MXT2 336 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 KPNA3O00505 521 aaPredicted RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 EPN2O95208 641 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 COX7A2P14406 83 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 JUNBP17275 347 aaPredicted RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ENGP17813 658 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 BDKRB1P46663 353 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 DPTQ07507 201 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ELP6Q0PNE2 266 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 HNRNPA1L2Q32P51 320 aaKnown RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 RFX4Q33E94 735 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 C11orf91Q3C1V1 193 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 POM121L1PQ3SYA9 428 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 SPIN4Q56A73 249 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ZZZ3Q8IYH5 903 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 C8orf59Q8N0T1 100 aaPredicted RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF366Q8N895 744 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 FOXJ1Q92949 421 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 COQ8BQ96D53 544 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 MED8Q96G25 268 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 SPATA9Q9BWV2 254 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ZCCHC2Q9C0B9 1178 aaKnown RBP15.63■□□□□ 0.09
UBE3D-201ENST00000237186 AMBRA1Q9C0C7 1298 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 SMURF2Q9HAU4 748 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 FAM8A1Q9UBU6 413 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 C3orf18Q9UK00 162 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 ITM2BQ9Y287 266 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 PCDHB11Q9Y5F2 797 aa15.63■□□□□ 0.09
UBE3D-201ENST00000237186 C17orf113A0A1B0GUU1 675 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 LINC01553A4QN01 128 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 SCAMP2O15127 329 aaKnown RBP15.62■□□□□ 0.09
UBE3D-201ENST00000237186 ETHE1O95571 254 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 CPNE6O95741 557 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 SEMG1P04279 462 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 ABCB1P08183 1280 aaPredicted RBP15.62■□□□□ 0.09
UBE3D-201ENST00000237186 SHMT2P34897 504 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 VAC14Q08AM6 782 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 LRRC74AQ0VAA2 488 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 LAPTM5Q13571 262 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 VEZF1Q14119 521 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 TCEAL5Q5H9L2 206 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 C9orf64Q5T6V5 341 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF773Q6PK81 442 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 XKR5Q6UX68 686 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 TMEM179BQ7Z7N9 219 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 TERB1Q8NA31 727 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 HUS1BQ8NHY5 278 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF480Q8WV37 535 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 HERVK_113Q902F9 699 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 HDAC2Q92769 488 aaKnown RBP15.62■□□□□ 0.09
UBE3D-201ENST00000237186 ISOC1Q96CN7 298 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 REPS1Q96D71 796 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 RSPRY1Q96DX4 576 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 DTNBP1Q96EV8 351 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF514Q96K75 400 aaPredicted RBP15.62■□□□□ 0.09
UBE3D-201ENST00000237186 SGPP1Q9BX95 441 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 MCOLN1Q9GZU1 580 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 CXorf21Q9HAI6 301 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 IL1RAPQ9NPH3 570 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 BTBD3Q9Y2F9 522 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 AP1M2Q9Y6Q5 423 aa15.62■□□□□ 0.09
UBE3D-201ENST00000237186 PRRC2BQ5JSZ5 2229 aaKnown RBP15.62■□□□□ 0.09
UBE3D-201ENST00000237186 EDDM13A0A1B0GTR0 161 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 TRIM64BA6NI03 449 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 GABRR3A8MPY1 467 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 PRRT4C9JH25 899 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 FOXE1O00358 373 aaPredicted RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 SLC16A6O15403 523 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 PAPLNO95428 1278 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms