RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SPPL2BQ8TCT7 592 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PPP1R13LQ8WUF5 828 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ABCD2Q9UBJ2 740 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 MYH2Q9UKX2 1941 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 LCHNA4D1U4 455 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 TRAPPC13A5PLN9 417 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 AGAP5A6NIR3 686 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 B8ZZF3 427 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 GKN3PP0CG01 181 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CBSLP0DN79 551 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 HDCP19113 662 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 DDX6P26196 483 aaKnown RBP eCLIP8.01□□□□□ -1.13
APOB-201ENST00000233242 CBSP35520 551 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ZNF676Q8N7Q3 588 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CIDECQ96AQ7 238 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 GJD4Q96KN9 370 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 RAB11FIP5Q9BXF6 653 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 FZD4Q9ULV1 537 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 TEX51A0A1B0GUA7 166 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 TRBC2A0A5B9 178 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 GMFGO60234 142 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CHMP24386 653 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 GADD45AP24522 165 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 SLC13A2Q13183 592 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 SLC30A6Q6NXT4 461 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PHYKPLQ8IUZ5 450 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 TFAP2BQ92481 460 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 AHCYL2Q96HN2 611 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 TTYH2Q9BSA4 534 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 FUNDC2Q9BWH2 189 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 SEZ6LQ9BYH1 1024 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PPA2Q9H2U2 334 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 TIGARQ9NQ88 270 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 QPCTLQ9NXS2 382 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 NOP16Q9Y3C1 178 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 MEGF6O75095 1541 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CITO14578 2027 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CRYBB1P53674 252 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 ZNF155Q12901 538 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 COL28A1Q2UY09 1125 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 DEDD2Q8WXF8 326 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ZNF382Q96SR6 550 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 RGCCQ9H4X1 137 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 AKR1A1P14550 325 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CNTN2Q02246 1040 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ZNF460Q14592 562 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 SERPINA9Q86WD7 417 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 MS4A12Q9NXJ0 267 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CPSF4LA6NMK7 179 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 TLR5O60602 858 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ADH6P28332 368 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 SMAD3P84022 425 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 PRKCDQ05655 676 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 NFE2L1Q14494 772 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 REEP3Q6NUK4 255 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 MBOAT1Q6ZNC8 495 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 LHCGRP22888 699 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 KCNAB2Q13303 367 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 FIBCD1Q8N539 461 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 OR56A1Q8NGH5 318 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PHPT1Q9NRX4 125 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 PPIEQ9UNP9 301 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 PADI2Q9Y2J8 665 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PI15O43692 258 aa8□□□□□ -1.13
APOB-201ENST00000233242 FGF19O95750 216 aa8□□□□□ -1.13
APOB-201ENST00000233242 NR2C1P13056 603 aa8□□□□□ -1.13
APOB-201ENST00000233242 DCP2Q8IU60 420 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 C1orf127Q8N9H9 656 aa8□□□□□ -1.13
APOB-201ENST00000233242 TRIM43Q96BQ3 446 aaPredicted RBP8□□□□□ -1.13
APOB-201ENST00000233242 POTEKPQ9BYX7 375 aa8□□□□□ -1.13
APOB-201ENST00000233242 ZNF304Q9HCX3 659 aa8□□□□□ -1.13
APOB-201ENST00000233242 EBF1Q9UH73 591 aa8□□□□□ -1.13
APOB-201ENST00000233242 A8MX80 341 aa8□□□□□ -1.13
APOB-201ENST00000233242 GRM6O15303 877 aa8□□□□□ -1.13
APOB-201ENST00000233242 CREBL2O60519 120 aaPredicted RBP8□□□□□ -1.13
APOB-201ENST00000233242 SNAP29O95721 258 aa8□□□□□ -1.13
APOB-201ENST00000233242 FGF3P11487 239 aaPredicted RBP8□□□□□ -1.13
APOB-201ENST00000233242 ATXN1P54253 815 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 OR8J1Q8NGP2 316 aa8□□□□□ -1.13
APOB-201ENST00000233242 DENND1AQ8TEH3 1009 aa8□□□□□ -1.13
APOB-201ENST00000233242 KCNN1Q92952 543 aa8□□□□□ -1.13
APOB-201ENST00000233242 PLIN4Q96Q06 1357 aa8□□□□□ -1.13
APOB-201ENST00000233242 CXorf49A8MYA2 514 aaPredicted RBP8□□□□□ -1.13
APOB-201ENST00000233242 SRCP12931 536 aa8□□□□□ -1.13
APOB-201ENST00000233242 NFKB2Q00653 900 aa8□□□□□ -1.13
APOB-201ENST00000233242 C11orf91Q3C1V1 193 aa8□□□□□ -1.13
APOB-201ENST00000233242 NEIL3Q8TAT5 605 aa8□□□□□ -1.13
APOB-201ENST00000233242 OSBPL2Q9H1P3 480 aa8□□□□□ -1.13
APOB-201ENST00000233242 ASAH2Q9NR71 780 aa8□□□□□ -1.13
APOB-201ENST00000233242 ARMC1Q9NVT9 282 aa8□□□□□ -1.13
APOB-201ENST00000233242 SOBPA7XYQ1 873 aa8□□□□□ -1.13
APOB-201ENST00000233242 E7ESA3 106 aa8□□□□□ -1.13
APOB-201ENST00000233242 SMIM10L2AP0DMW4 78 aa8□□□□□ -1.13
APOB-201ENST00000233242 SMIM10L2BP0DMW5 78 aa8□□□□□ -1.13
APOB-201ENST00000233242 HOXA10P31260 410 aaPredicted RBP8□□□□□ -1.13
APOB-201ENST00000233242 OR52E8Q6IFG1 317 aa8□□□□□ -1.13
APOB-201ENST00000233242 RPL13AP3Q6NVV1 102 aa8□□□□□ -1.13
APOB-201ENST00000233242 TSPYL5Q86VY4 417 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms