RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 SRMSQ9H3Y6 488 aa12.73□□□□□ -0.37
HDAC7-201ENST00000080059 PCDHGA7Q9Y5G6 932 aa12.73□□□□□ -0.37
HDAC7-201ENST00000080059 IGLV3-10A0A075B6K4 115 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 EFCAB10A6NFE3 127 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 LRRC72A6NJI9 287 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 TRIM24O15164 1050 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 PDPK1O15530 556 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 ERI3O43414 337 aaKnown RBP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 RGS10O43665 173 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 SLC16A8O95907 504 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 BMP7P18075 431 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 FBXO46Q6PJ61 603 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 MAVSQ7Z434 540 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 SLC34A3Q8N130 599 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 NRG4Q8WWG1 115 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 SLC5A11Q8WWX8 675 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 TRMT2BQ96GJ1 504 aaKnown RBP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 CCM2LQ9NUG4 571 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 TOR4AQ9NXH8 423 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 NRXN2Q9P2S2 1712 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 NUP214P35658 2090 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 H3BSA7 217 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 DGKEP52429 567 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 TLR1Q15399 786 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 ARHGAP22Q7Z5H3 698 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 TPK1Q9H3S4 243 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 A0A1W2PP55 124 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 FADS2P1A8MWK0 482 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 CCNDBP1O95273 360 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 CA3P07451 260 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 HNRNPA1P09651 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 PTX3P26022 381 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 TMED10P49755 219 aaKnown RBP12.72□□□□□ -0.37
HDAC7-201ENST00000080059 RAB8AP61006 207 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 COPZ1P61923 177 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 GRIK2Q13002 908 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 SP140Q13342 867 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 SNAP47Q5SQN1 464 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 DCST1Q5T197 706 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 OR2T5Q6IEZ7 315 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 PRR23BQ6ZRT6 265 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 HTR3DQ70Z44 454 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 NUDT13Q86X67 352 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 OR2T29Q8NH02 315 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 HHIPL1Q96JK4 782 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 COL21A1Q96P44 957 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 KXD1Q9BQD3 176 aa12.72□□□□□ -0.37
HDAC7-201ENST00000080059 PIPSLA2A3N6 862 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 GADD45GO95257 159 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 NPPAP01160 153 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 IGLV3-25P01717 112 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 NT5EP21589 574 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 ALDH4A1P30038 563 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 NPAS3Q8IXF0 933 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 C1QTNF1Q9BXJ1 281 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 KLHL25Q9H0H3 589 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 LHX3Q9UBR4 397 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 HIDE1A8MVS5 230 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 RPS17P08708 135 aaKnown RBP12.71□□□□□ -0.37
HDAC7-201ENST00000080059 HOXB2P14652 356 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 HMGA1P17096 107 aaKnown RBP12.71□□□□□ -0.37
HDAC7-201ENST00000080059 LBX1P52954 281 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 RGS8P57771 180 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-201ENST00000080059 GRSF1Q12849 480 aaKnown RBP eCLIP12.71□□□□□ -0.37
HDAC7-201ENST00000080059 SCARB2Q14108 478 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 PACRGLQ8N7B6 248 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 HM13Q8TCT9 377 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 RHBDF1Q96CC6 855 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 Q96MT0 163 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 SLC30A3Q99726 388 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 XKR8Q9H6D3 395 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 FAM120CQ9NX05 1096 aaKnown RBP12.71□□□□□ -0.37
HDAC7-201ENST00000080059 PCDH10Q9P2E7 1040 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 PRSS21Q9Y6M0 314 aa12.71□□□□□ -0.37
HDAC7-201ENST00000080059 KAT7O95251 611 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 CDH3P22223 829 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 FMO3P31513 532 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 GRIN2CQ14957 1233 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 TYSND1Q2T9J0 566 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 GTDC1Q4AE62 458 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 ARMC4Q5T2S8 1044 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 MPP7Q5T2T1 576 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 NEK5Q6P3R8 708 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 ZFAND4Q86XD8 727 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 DCUN1D3Q8IWE4 304 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 MRPL43Q8N983 215 aaKnown RBP12.71□□□□□ -0.38
HDAC7-201ENST00000080059 PIH1D2Q8WWB5 315 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 PKP4Q99569 1192 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 SLC2A11Q9BYW1 496 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 ATP6V1HQ9UI12 483 aa12.71□□□□□ -0.38
HDAC7-201ENST00000080059 QSER1Q2KHR3 1735 aa12.7□□□□□ -0.38
HDAC7-201ENST00000080059 OR6B1O95007 311 aa12.7□□□□□ -0.38
HDAC7-201ENST00000080059 SNAP29O95721 258 aa12.7□□□□□ -0.38
HDAC7-201ENST00000080059 C6orf47O95873 294 aa12.7□□□□□ -0.38
HDAC7-201ENST00000080059 ARSFP54793 590 aa12.7□□□□□ -0.38
HDAC7-201ENST00000080059 MTAPQ13126 283 aa12.7□□□□□ -0.38
HDAC7-201ENST00000080059 PCBP2Q15366 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms