RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Zswim1Q9CWV7 455 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Bcl7aQ9CXE2 210 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr706Q9EPF8 316 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Sars2Q9JJL8 518 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 NynrinQ5DTZ0 1840 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Nudt1P53368 156 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Prelid2Q0VBB0 177 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 DtlQ3TLR7 729 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 BC030870Q3V2G4 71 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tusc1Q673H1 205 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Dpy19l3Q71B07 716 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr1036Q7TR85 310 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr1015Q7TR94 312 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Lats2Q7TSJ6 1042 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tspan18Q80WR1 248 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Vps9d1Q8C190 649 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 KptnQ8VCX6 430 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 NrarpQ91ZA8 114 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 GhdcQ99J23 532 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fcf1Q9CTH6 198 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cog8Q9JJA2 640 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Stau1Q9Z108 487 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cilp2D3Z7H8 1162 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tulp3O88413 460 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cpa3P15089 417 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cdc42P60766 191 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Scgb1a1Q06318 96 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Prss53Q571E5 552 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Coq8aQ60936 645 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Zrsr1Q64707 428 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Mvb12bQ6KAU4 317 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 FukQ7TMC8 1090 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Dsg4Q7TMD7 1041 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr412Q7TRW7 312 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Q810M1 233 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fbxo30Q8BJL1 746 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 BpifcQ8C186 509 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Art3Q8R2G4 371 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr371Q8VGB8 312 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr170Q8VGL6 313 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Pex16Q91XC9 336 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Wdr55Q9CX97 388 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Snap29Q9ERB0 260 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Nectin1Q9JKF6 515 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Unc13cQ8K0T7 2210 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Arid1aA2BH40 2283 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Vmn1r9A2RST7 299 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Smim18J3QNP2 93 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Chst3O88199 472 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cers1P27545 350 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 PtnP63089 168 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Myl12bQ3THE2 172 aaKnown RBP11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 SbplQ3TUY3 232 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm45902Q3UDN3 361 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 AbrQ5SSL4 859 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Klra2Q60660 288 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 BadQ61337 204 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 ScocQ78YZ6 125 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cadm2Q8BLQ9 435 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Bend7Q8BSV3 434 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr1461Q8VEV7 312 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr690Q8VH18 315 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Slc2a10Q8VHD6 536 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tmem150aQ91WN2 271 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Art4Q9CRA0 300 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Slc19a2Q9EQN9 498 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Vmn1r10W4VSP8 311 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Prrg1A2BFE8 218 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ces2hF6Z9B9 558 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Vmn2r85G3UW56 850 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Serpina3cP29621 417 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 HadhQ61425 314 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Hsd3b5Q61694 373 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ptpn7Q8BUM3 359 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cyp2j9Q924D1 502 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Kdelr2Q9CQM2 212 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ern1Q9EQY0 977 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Hapln2Q9ESM3 341 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Asb4Q9WV71 426 aa11.02□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ascc3E9PZJ8 2198 aaKnown RBP11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Kpna6O35345 536 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 MaffO54791 156 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Wsb2O54929 404 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Aldh1a1P24549 501 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Polr2cP97760 275 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Elmod1Q3V1U8 326 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 PdhxQ8BKZ9 501 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Znf322Q8BZ89 410 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Hddc3Q9D114 179 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Col2a1P28481 1487 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ltbp4Q8K4G1 1666 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Wfdc16A2A5H4 111 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zw10O54692 779 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Sap18O55128 153 aaKnown RBP11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Mkln1O89050 735 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cd93O89103 644 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Enpp1P06802 906 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Slc1a5P51912 553 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 HccsP53702 272 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Mapk1P63085 358 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms