RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gm853Q3UNZ2 425 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Xkr5Q5GH66 676 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Klhl23Q6GQU2 558 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Eif3lQ8QZY1 564 aaKnown RBP15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr441Q8VFS5 310 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Kiaa2013Q91X21 634 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Mto1Q923Z3 669 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Trim16Q99PP9 556 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Hmg20aQ9DC33 346 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Htra1Q9R118 480 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 AicdaQ9WVE0 198 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Cldn8Q9Z260 225 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Syndig1A2ANU3 258 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 FanceB8JJD6 213 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn2r114E9Q281 856 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Arhgap40E9Q6X9 672 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm7535F7CXE4 302 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Cbx4O55187 551 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 GfapP03995 430 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 JundP15066 341 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Csf2rb2P26954 878 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Htr1bP28334 386 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Tmem181aQ3U3W2 474 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Ipcef1Q5DU31 406 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr1364Q5SZS9 314 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Bhlhb9Q6PB60 539 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr1355Q7TQU9 310 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Trim31Q8R0K2 507 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn1r84Q8R284 318 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 PglsQ9CQ60 257 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 OoepQ9CWE6 164 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Tex22Q9D9U4 189 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Elovl2Q9JLJ4 292 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Gipc2Q9Z2H7 314 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm10718D3Z1I7 227 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn2r112L7N221 857 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Slc22a8O88909 537 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Gnpda1O88958 289 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 P06324 132 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 MndaP0DOV1 425 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Mkl2P59759 1080 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Ap1s1P61967 158 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Dok6Q2MHE5 331 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Prkd1Q62101 918 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Sephs1Q8BH69 392 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Znf410Q8BKX7 478 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 PgghgQ8BP56 690 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Rbms2Q8VC70 383 aaKnown RBP15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr729Q8VET4 323 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Cbr4Q91VT4 236 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Dsn1Q9CYC5 348 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Cyp2c55Q9D816 490 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 GabarapQ9DCD6 117 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Dap3Q9ER88 391 aaKnown RBP15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Enpp2Q9R1E6 862 aa15.96■□□□□ 0.15
Shh-201ENSMUST00000002708 Cyr61P18406 379 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Nat1P50294 290 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Idh2P54071 452 aaKnown RBP15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 NfycP70353 335 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Arhgef15Q5FWH6 849 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Vac14Q80WQ2 782 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Arhgap19Q8BRH3 494 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Bdh2Q8JZV9 245 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Spp2Q8K1I3 203 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gprc6aQ8K4Z6 928 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Med17Q8VCD5 649 aaKnown RBP15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr357Q8VFP4 308 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Rad18Q9QXK2 509 aaKnown RBP15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 A0A286YCD0 109 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Zfp846G3X996 541 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm21897J3KMP5 500 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm21750L7N228 499 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Hsd17b10O08756 261 aaKnown RBP15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Npc1O35604 1277 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Fcgr2P08101 330 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 CryaaP24622 196 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Akt1P31750 480 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gabarapl2P60521 117 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 EpycP70186 322 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 VldlrP98156 873 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 MocosQ14CH1 862 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Pik3c3Q6PF93 887 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr1015Q7TR94 312 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Rap2aQ80ZJ1 183 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Hmbox1Q8BJA3 419 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Elmo1Q8BPU7 727 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Zbtb20Q8K0L9 741 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Rnf208Q8K0W3 265 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Vmn1r30Q8R2D2 302 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Cyp4f3Q99N16 524 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Ska1Q9CPV1 254 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 MINDY3Q9CV28 444 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Vsig1Q9D2J4 407 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 RgrQ9Z2B3 291 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Prrg1A2BFE8 218 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Ces2hF6Z9B9 558 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Dhcr7O88455 471 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Cdc6O89033 562 aaKnown RBP15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 H2-D1P14427 368 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Cdc25bP30306 576 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms