RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 AGAP14A8MT82 685 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 EIF3FO00303 357 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-233ENST00000642021 PCDHGA12O60330 932 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 WBP4O75554 376 aaKnown RBP13.42□□□□□ -0.26
PHGDH-233ENST00000642021 ITPKAP23677 461 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 AOAHP28039 575 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 DNAJA1P31689 397 aaKnown RBP13.42□□□□□ -0.26
PHGDH-233ENST00000642021 KRT20P35900 424 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 KIR3DL1P43629 444 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
PHGDH-233ENST00000642021 UGT8Q16880 541 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 INAVAQ3KP66 663 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 TTLL9Q3SXZ7 439 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 DGKKQ5KSL6 1271 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 NOXRED1Q6NXP6 359 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 CRTC1Q6UUV9 634 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 Q6ZPB1 254 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-233ENST00000642021 ZNF621Q6ZSS3 439 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 TPGS1Q6ZTW0 290 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 RNF180Q86T96 592 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 TMEM150AQ86TG1 271 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 SERPINA11Q86U17 422 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 CLECL1Q8IZS7 167 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 DCAF4L2Q8NA75 395 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 TBC1D20Q96BZ9 403 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 CMTM7Q96FZ5 175 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 PANX1Q96RD7 426 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 CENPOQ9BU64 300 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 ATG10Q9H0Y0 220 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 POLE4Q9NR33 117 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 KCTD5Q9NXV2 234 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 BTBD3Q9Y2F9 522 aa13.42□□□□□ -0.26
PHGDH-233ENST00000642021 ZBBXA8MT70 800 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 EVPLLA8MZ36 301 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 FPGTO14772 594 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 FABP3P05413 133 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 NUDT7P0C024 238 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 COL6A1P12109 1028 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 TGM1P22735 817 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 NSG1P42857 185 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 CXCR4P61073 352 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 CREMQ03060 361 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 IQCCQ4KMZ1 466 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 TET1Q8NFU7 2136 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 LGALS12Q96DT0 336 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 HSH2DQ96JZ2 352 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 HERC2P3Q9BVR0 1158 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 SLIRPQ9GZT3 109 aaKnown RBP13.41□□□□□ -0.26
PHGDH-233ENST00000642021 ELAC1Q9H777 363 aaKnown RBP13.41□□□□□ -0.26
PHGDH-233ENST00000642021 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 FBXO8Q9NRD0 319 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 SCN3BQ9NY72 215 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 SNX6Q9UNH7 406 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 SAMHD1Q9Y3Z3 626 aaKnown RBP13.41□□□□□ -0.26
PHGDH-233ENST00000642021 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 N6AMT1Q9Y5N5 214 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 ARHGEF15O94989 841 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 FKBP9O95302 570 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 FPR1P21462 350 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 CRYBA2P53672 197 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 RPS3AP61247 264 aaKnown RBP13.41□□□□□ -0.26
PHGDH-233ENST00000642021 RPP38P78345 283 aaKnown RBP13.41□□□□□ -0.26
PHGDH-233ENST00000642021 HIST2H2ACQ16777 129 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-233ENST00000642021 DGUOKQ16854 277 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 GPR33Q49SQ1 333 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 PDE12Q6L8Q7 609 aaKnown RBP13.41□□□□□ -0.26
PHGDH-233ENST00000642021 ATG16L2Q8NAA4 619 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 APH1BQ8WW43 257 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 P2RY13Q9BPV8 354 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 SACM1LQ9NTJ5 587 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 RNF186Q9NXI6 227 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
PHGDH-233ENST00000642021 A0A1W2PQ67 120 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TTC34A8MYJ7 566 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 GFRA2O00451 464 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 RGS10O43665 173 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 BNIP3LO60238 219 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 FAM20BO75063 409 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 CPSF4O95639 269 aaKnown RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TGFBR2P37173 567 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 SLC6A12P48065 614 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 ST13P50502 369 aaKnown RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 MTAPQ13126 283 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TAF12Q16514 161 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 DUOXA1Q1HG43 343 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 LRRC73Q5JTD7 316 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 LYPLAL1Q5VWZ2 237 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 NCCRP1Q6ZVX7 275 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 AHSA2Q719I0 299 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 PAGE2Q7Z2X7 111 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 NANOGNBQ7Z5D8 188 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 DSG4Q86SJ6 1040 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 ADCK1Q86TW2 530 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 ARL14EPQ8N8R7 260 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 L3MBTL4Q8NA19 623 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 SLC12A9Q9BXP2 914 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms