RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CCDC138Q96M89 665 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 CATSPER2Q96P56 530 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 TMEM237Q96Q45 408 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 PKP4Q99569 1192 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 MVB12BQ9H7P6 319 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 WWOXQ9NZC7 414 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 AKAP7Q9P0M2 348 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 ZNF624Q9P2J8 865 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 PISDQ9UG56 409 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 POLQO75417 2590 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 STX16-NPEPL1H3BU86 382 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 STX16O14662 325 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 BIRC5O15392 142 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 KLK8O60259 260 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 IPO13O94829 963 aaKnown RBP9.08□□□□□ -0.96
PHGDH-228ENST00000641847 VIPP01282 170 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 NEFHP12036 1026 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 XRCC1P18887 633 aaPredicted RBP9.08□□□□□ -0.96
PHGDH-228ENST00000641847 BGNP21810 368 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 NDUFS1P28331 727 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 IMPA1P29218 277 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 EEF1DP29692 281 aaKnown RBP9.08□□□□□ -0.96
PHGDH-228ENST00000641847 HNMTP50135 292 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 PRKAA2P54646 552 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 SETDB1Q15047 1291 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 C18orf21Q32NC0 220 aaPredicted RBP9.08□□□□□ -0.96
PHGDH-228ENST00000641847 FBXO48Q5FWF7 155 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 CDKL4Q5MAI5 379 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 FHL5Q5TD97 284 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 SULT1C3Q6IMI6 304 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 SLC9B2Q86UD5 537 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 NUDCD3Q8IVD9 361 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 SFRP1Q8N474 314 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 RAB42Q8N4Z0 105 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 ARL10Q8N8L6 244 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 OR52E1Q8NGJ3 308 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 OR9A1PQ8NGU1 263 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 PPP1R14CQ8TAE6 165 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 C9orf43Q8TAL5 461 aaPredicted RBP9.08□□□□□ -0.96
PHGDH-228ENST00000641847 UBTD2Q8WUN7 234 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 RHBDF1Q96CC6 855 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 FBXL8Q96CD0 374 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 CCDC126Q96EE4 140 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 IL17FQ96PD4 163 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 CMKLR1Q99788 373 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 TMEM79Q9BSE2 394 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 STN1Q9H668 368 aaKnown RBP9.08□□□□□ -0.96
PHGDH-228ENST00000641847 KIR3DX1Q9H7L2 352 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 OXSMQ9NWU1 459 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 SPATA7Q9P0W8 599 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 STOX2Q9P2F5 926 aaPredicted RBP9.08□□□□□ -0.96
PHGDH-228ENST00000641847 CPNE7Q9UBL6 633 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 POLG2Q9UHN1 485 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 PADI4Q9UM07 663 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 COLEC10Q9Y6Z7 277 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 ITPR3Q14573 2671 aa9.08□□□□□ -0.96
PHGDH-228ENST00000641847 ICE1Q9Y2F5 2266 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 LRRC14BA6NHZ5 514 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 STMND1H3BQB6 276 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 TAPBPO15533 448 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 KDM1AO60341 852 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 TRIM13O60858 407 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 VPS4BO75351 444 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 H2AFYO75367 372 aaKnown RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 SIX3O95343 332 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 SLC16A8O95907 504 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 RPS17P08708 135 aaKnown RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 FGF3P11487 239 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ELAVL4P26378 380 aaKnown RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 PKLRP30613 574 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 SLC19A1P41440 591 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 HSPA7P48741 367 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 AGTR2P50052 363 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 PNLIPRP1P54315 467 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 GYS2P54840 703 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ALDH18A1P54886 795 aaKnown RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 DNAJB13P59910 316 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 TBPL1P62380 186 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 HERVK_113P63132 956 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 GUCY1A3Q02108 690 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 HHEXQ03014 270 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ASPHQ12797 758 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 SRSF6Q13247 344 aaKnown RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 BIRC2Q13490 618 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 GPR18Q14330 331 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 PLCL1Q15111 1095 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 CHI3L2Q15782 390 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 PDK4Q16654 411 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 C14orf28Q4W4Y0 310 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 PERM1Q5SV97 790 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 TTC19Q6DKK2 380 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 HIST2H2BCQ6DN03 193 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 AGTRAPQ6RW13 159 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ZCCHC23Q6ZST2 131 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 RBM12BQ8IXT5 1001 aaKnown RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 AVL9Q8NBF6 648 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 PPFIBP2Q8ND30 876 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 OR6C4Q8NGE1 309 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ATL1Q8WXF7 558 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms