RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 TCEAL4Q96EI5 215 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 TPD52L3Q96J77 140 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 CAPNS2Q96L46 248 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 TUBA1CQ9BQE3 449 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 C3orf18Q9UK00 162 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 PSME2Q9UL46 239 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 HCFC2Q9Y5Z7 792 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 ACPPP15309 386 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 IRF8Q02556 426 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 TLE2Q04725 743 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 ZNF829Q3KNS6 432 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-223ENST00000641597 CYP27C1Q4G0S4 372 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 MPPE1Q53F39 396 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 XKR6Q5GH73 641 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 C16orf87Q6PH81 154 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 HTR3DQ70Z44 454 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 CCDC71Q8IV32 467 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-223ENST00000641597 MCOLN3Q8TDD5 553 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 LMLNQ96KR4 655 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 LYSMD1Q96S90 227 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 ARHGEF33A8MVX0 844 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 FADS2P1A8MWK0 482 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 FKBP9O95302 570 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 CXCL10P02778 98 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 ABCB1P08183 1280 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-223ENST00000641597 COX7A2P14406 83 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 FUT4P22083 530 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 PBLDP30039 288 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-223ENST00000641597 OPRL1P41146 370 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 BDKRB1P46663 353 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 CTSCP53634 463 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 TSTA3Q13630 321 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-223ENST00000641597 TMEM215Q68D42 235 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 FKBP9P1Q75LS8 142 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 TMC8Q8IU68 726 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 ZZZ3Q8IYH5 903 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 ST13P5Q8NFI4 369 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-223ENST00000641597 CMTM7Q96FZ5 175 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 OR4K3Q96R72 315 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 DNAJC11Q9NVH1 559 aa16.3■□□□□ 0.2
PHGDH-223ENST00000641597 PDP1Q9P0J1 537 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-223ENST00000641597 IGLV3-16A0A075B6K0 115 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 WNT9AO14904 365 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 CCL16O15467 120 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 LATS1O95835 1130 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 ANGPTL1O95841 491 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 IDUAP35475 653 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 ABHD18Q0P651 414 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 NOGQ13253 232 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 CTF1Q16619 201 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 TRIM60Q495X7 471 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 FAM180BQ6P0A1 224 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 LRRC70Q7Z2Q7 622 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 NDNFQ8TB73 568 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 FAR1Q8WVX9 515 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 MUL1Q969V5 352 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 HSH2DQ96JZ2 352 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 MCCC1Q96RQ3 725 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-223ENST00000641597 TMEM121BQ9BXQ6 578 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-223ENST00000641597 RMND5AQ9H871 391 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 CHD9Q3L8U1 2897 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 MAGEB17A8MXT2 336 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 GFYI3L273 518 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 NUAK1O60285 661 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 PDHA2P29803 388 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 HOXA9P31269 272 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 PPP3CCP48454 512 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 CSNK1DP48730 415 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 NAE1Q13564 534 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 DOC2AQ14183 400 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 NR1D2Q14995 579 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 L3MBTL4Q8NA19 623 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 PIK3C3Q8NEB9 887 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 ABHD11Q8NFV4 315 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 RAB2BQ8WUD1 216 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 TESCQ96BS2 214 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 RIOK2Q9BVS4 552 aaKnown RBP16.29■□□□□ 0.2
PHGDH-223ENST00000641597 TBC1D23Q9NUY8 699 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 TMEM184CQ9NVA4 438 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 ITM2BQ9Y287 266 aa16.29■□□□□ 0.2
PHGDH-223ENST00000641597 SAP18O00422 153 aaKnown RBP16.28■□□□□ 0.2
PHGDH-223ENST00000641597 TSPAN6O43657 245 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 RECQL5O94762 991 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-223ENST00000641597 OPN1SWP03999 348 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 FUCA1P04066 466 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 MASP1P48740 699 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 ITGADQ13349 1161 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 GAB1Q13480 694 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 VMACQ2NL98 169 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 SMU1Q2TAY7 513 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 HKDC1Q2TB90 917 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 OR2T5Q6IEZ7 315 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
PHGDH-223ENST00000641597 TRIM74Q86UV6 250 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 OR2A12Q8NGT7 310 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 OR2T29Q8NH02 315 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 BORCS5Q969J3 196 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 RAD21L1Q9H4I0 556 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 FAIMQ9NVQ4 179 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 CLPXO76031 633 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms