RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PLAGL1Q9UM63 463 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 SUFUQ9UMX1 484 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 RUVBL1Q9Y265 456 aaKnown RBP16.69■□□□□ 0.26
PHGDH-208ENST00000641023 GPSM3Q9Y4H4 160 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 LRRC72A6NJI9 287 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 HOXC4P09017 264 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-208ENST00000641023 ERGP11308 486 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 IDSP22304 550 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 ACSL1P33121 698 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 EEFSECP57772 596 aaKnown RBP16.69■□□□□ 0.26
PHGDH-208ENST00000641023 SLBPQ14493 270 aaKnown RBP eCLIP16.69■□□□□ 0.26
PHGDH-208ENST00000641023 NXPE4Q6UWF7 544 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 PQLC1Q8N2U9 271 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 DNAJB8Q8NHS0 232 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 UBE2E3Q969T4 207 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 FCRL1Q96LA6 429 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 OR52E6Q96RD3 313 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 CGREF1Q99674 301 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 TRIM15Q9C019 465 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 SPATA7Q9P0W8 599 aa16.69■□□□□ 0.26
PHGDH-208ENST00000641023 FPGTO14772 594 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 C8BP07358 591 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 PRPS1L1P21108 318 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 CD72P21854 359 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 TACR1P25103 407 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 YBX1P67809 324 aaKnown RBP16.68■□□□□ 0.26
PHGDH-208ENST00000641023 SKIV2LQ15477 1246 aaKnown RBP16.68■□□□□ 0.26
PHGDH-208ENST00000641023 ICE2Q659A1 982 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 CYP2R1Q6VVX0 501 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 TRIM69Q86WT6 500 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 LAS2Q8IYD9 372 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 LMNTD1Q8N9Z9 388 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 OR2T34Q8NGX1 318 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 GTF2H4Q92759 462 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 ZUFSPQ96AP4 578 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 TESCQ96BS2 214 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 C12orf66Q96MD2 445 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 FERD3LQ96RJ6 166 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 PCBD2Q9H0N5 130 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 MUC13Q9H3R2 512 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 GEMIN8Q9NWZ8 242 aaKnown RBP16.68■□□□□ 0.26
PHGDH-208ENST00000641023 KCNK6Q9Y257 313 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 WDR37Q9Y2I8 494 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 PIPSLA2A3N6 862 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 DNAJA2O60884 412 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 S100A3P33764 101 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 LIPEQ05469 1076 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 DPY19L1Q2PZI1 675 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 SPIN4Q56A73 249 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 SYT12Q8IV01 421 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 OR8J3Q8NGG0 315 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 SH3KBP1Q96B97 665 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 SCARF2Q96GP6 870 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-208ENST00000641023 NAF1Q96HR8 494 aaKnown RBP16.68■□□□□ 0.26
PHGDH-208ENST00000641023 PPM1MQ96MI6 270 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 INSM2Q96T92 566 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-208ENST00000641023 KCTD14Q9BQ13 255 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-208ENST00000641023 TRIM8Q9BZR9 551 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 RMND5AQ9H871 391 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 ACTR3BQ9P1U1 418 aa16.68■□□□□ 0.26
PHGDH-208ENST00000641023 TNRC18O15417 2968 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-208ENST00000641023 A0A1W2PPC1 479 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 POM121BA6NF01 834 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 SHISA7A6NL88 538 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 FOXE1O00358 373 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-208ENST00000641023 LATO43561 262 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 PRMT3O60678 531 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 SRFP11831 508 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 GABRG2P18507 467 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 GSK3BP49841 420 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 KIAA1024LP59773 190 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 CYP2A13Q16696 494 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 LPCAT2Q7L5N7 544 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 IFNEQ86WN2 208 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 TMEM126BQ8IUX1 230 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 TMEM74Q96NL1 305 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 ZNF184Q99676 751 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-208ENST00000641023 CD93Q9NPY3 652 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 EGFL7Q9UHF1 273 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 SH2B3Q9UQQ2 575 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 AP4S1Q9Y587 144 aa16.67■□□□□ 0.26
PHGDH-208ENST00000641023 TCRBV3S1A0A5B6 114 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 AQP12BA6NM10 295 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 MAN2B1O00754 1011 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 CASQ2O14958 399 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 HNRNPA2B1P22626 353 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 HTR1BP28222 390 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 GRIA3P42263 894 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 RPS13P62277 151 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 PHEXP78562 749 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 PLIN5Q00G26 463 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 TRIP10Q15642 601 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 CCDC85BQ15834 202 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 AASDHQ4L235 1098 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 ADNP2Q6IQ32 1131 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 GPR180Q86V85 440 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 C17orf64Q86WR6 236 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 PTRH1Q86Y79 214 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 AQP12AQ8IXF9 295 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 RIMKLAQ8IXN7 391 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms