RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	TMCO2	Q7Z6W1	182 aa	Predicted RBP	7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	HIPK1	Q86Z02	1210 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	CRLF3	Q8IUI8	442 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	UNC5B	Q8IZJ1	945 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	PCDH20	Q8N6Y1	951 aa	Known RBP	7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	RNF139	Q8WU17	664 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	KIAA1191	Q96A73	305 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	FAF2	Q96CS3	445 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	PPP3R2	Q96LZ3	170 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	QRFPR	Q96P65	431 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	ADI1	Q9BV57	179 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	HDHD5	Q9BXW7	423 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC22A4	Q9H015	551 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	BTBD1	Q9H0C5	482 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	SUV39H2	Q9H5I1	410 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	XKR8	Q9H6D3	395 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	SEMA3G	Q9NS98	782 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	CATSPERZ	Q9NTU4	200 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	VSX1	Q9NZR4	365 aa	Predicted RBP	7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	BFAR	Q9NZS9	450 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	COPZ2	Q9P299	210 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	ANAPC2	Q9UJX6	822 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	RUVBL1	Q9Y265	456 aa	Known RBP	7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	BTBD3	Q9Y2F9	522 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	PCDHGA7	Q9Y5G6	932 aa		7.76	□□□□□ -1.17
RTTN-223	ENST00000640931	CIB4	A0PJX0	185 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	FAM170B	A6NMN3	283 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931		E5RI56	91 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931		E7ENX8	843 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	NBN	O60934	754 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	KLHL18	O94889	574 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TOP3B	O95985	862 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	BGN	P21810	368 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	RPL10	P27635	214 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	GRK4	P32298	578 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	CAPG	P40121	348 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ETV4	P43268	484 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	OR1G1	P47890	313 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ALDH9A1	P49189	494 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	CCT3	P49368	545 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	KPNA2	P52292	529 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC7A2	P52569	658 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ATP12A	P54707	1039 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	AQP5	P55064	265 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	CDH4	P55283	916 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ARPP19	P56211	112 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC3A1	Q07837	685 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	MERTK	Q12866	999 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	DPYSL2	Q16555	572 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	HIF1A	Q16665	826 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	KIF19	Q2TAC6	998 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC25A52	Q3SY17	297 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	CATSPERE	Q5SY80	951 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	INTS11	Q5TA45	600 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	XAF1	Q6GPH4	301 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SULT1C3	Q6IMI6	304 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	DENND5B	Q6ZUT9	1274 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SSX9	Q7RTT3	188 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	LHFPL3	Q86UP9	236 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PPIL6	Q8IXY8	311 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	KRT78	Q8N1N4	520 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	KDF1	Q8NAX2	398 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	OR6M1	Q8NGM8	313 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	OR13J1	Q8NGT2	312 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	RNASE11	Q8TAA1	199 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	DYNC2LI1	Q8TCX1	351 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC5A11	Q8WWX8	675 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TOP1MT	Q969P6	601 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	EXOSC8	Q96B26	276 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PTER	Q96BW5	349 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	BIRC7	Q96CA5	298 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	AP2M1	Q96CW1	435 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TUBGCP3	Q96CW5	907 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TMCO6	Q96DC7	493 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SCLY	Q96I15	445 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ELMO2	Q96JJ3	720 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	LURAP1	Q96LR2	239 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	DCLRE1C	Q96SD1	692 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	NPY6R	Q99463	290 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ZBTB18	Q99592	522 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PKMYT1	Q99640	499 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	MED18	Q9BUE0	208 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	MMP27	Q9H306	513 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TTYH1	Q9H313	450 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TOR3A	Q9H497	397 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ZDHHC4	Q9NPG8	344 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ENAM	Q9NRM1	1142 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	GDE1	Q9NZC3	331 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	IFT80	Q9P2H3	777 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	MID2	Q9UJV3	735 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	FBXL21	Q9UKT6	434 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	MKLN1	Q9UL63	735 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	A3GALT2	U3KPV4	340 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	MEIOC	A2RUB1	952 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	AGAP5	A6NIR3	686 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	CXorf49	A8MYA2	514 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TRIM49D1	C9J1S8	452 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC30A4	O14863	429 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms