RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ABHD18Q0P651 414 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 SLC13A2Q13183 592 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 CRTC1Q6UUV9 634 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 HJURPQ8NCD3 748 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 UTP15Q8TED0 518 aaKnown RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 PROX1Q92786 737 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 DACH2Q96NX9 599 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 HTATIP2Q9BUP3 242 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 GNG14A0A1W2PPG7 69 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 MAGEB17A8MXT2 336 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 FAM220BPB1ANY3 271 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 DBTP11182 482 aaKnown RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 CD36P16671 472 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 IFITM3Q01628 133 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 CREMQ03060 361 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 TOP3AQ13472 1001 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 DSG4Q86SJ6 1040 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 CMTM8Q8IZV2 173 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 SETD9Q8NE22 299 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 USP7Q93009 1102 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 KLHL25Q9H0H3 589 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 ITM2CQ9NQX7 267 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 THUMPD1Q9NXG2 353 aaKnown RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 COL4A4P53420 1690 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 SAP18O00422 153 aaKnown RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 RGS10O43665 173 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 LAMP1P11279 417 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 SELPP16109 830 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 WEE1P30291 646 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 HKDC1Q2TB90 917 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 FRG2Q64ET8 278 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 BBS7Q8IWZ6 715 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 NELL1Q92832 810 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 ZHX1-C8orf76Q96EF9 292 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 ALPK1Q96QP1 1244 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 FRG2BQ96QU4 278 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 APOL4Q9BPW4 351 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 PRAMEF4O60810 478 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 CCNDBP1O95273 360 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 KDELR2P33947 212 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 NRIP1P48552 1158 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 LMAN2Q12907 356 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 MTA1Q13330 715 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 CBX2Q14781 532 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 DGUOKQ16854 277 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 PRAMEF9Q5VWM5 478 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 TRIT1Q9H3H1 467 aaKnown RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 ZBTB20Q9HC78 741 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-221ENST00000640341 INIPQ9NRY2 104 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 ABCB8Q9NUT2 735 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 SIRT5Q9NXA8 310 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 USE1Q9NZ43 259 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 CFAP97Q9P2B7 532 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 BTBD3Q9Y2F9 522 aa14.16□□□□□ -0.14
SCARB2-221ENST00000640341 CA12O43570 354 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 SERPINB7O75635 380 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 IGSF6O95976 241 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 BMP4P12644 408 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 ITIH1P19827 911 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 CD9P21926 228 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 KRT20P35900 424 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 CRATP43155 626 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 PPP3CCP48454 512 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 RPP38P78345 283 aaKnown RBP14.15□□□□□ -0.14
SCARB2-221ENST00000640341 B4GALNT1Q00973 533 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 ACSM2AQ08AH3 577 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 VMACQ2NL98 169 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 SOWAHCQ53LP3 525 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-221ENST00000640341 ACSM2BQ68CK6 577 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 NIPAL1Q6NVV3 410 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 SHQ1Q6PI26 577 aaKnown RBP14.15□□□□□ -0.14
SCARB2-221ENST00000640341 ANKRD13BQ86YJ7 626 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 ZNF461Q8TAF7 563 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 ERVK-11Q9UQG0 969 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 TRIM43BA6NCK2 446 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 A8MU76 341 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 OR56A5P0C7T3 313 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 LHCGRP22888 699 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 DCAF4L2Q8NA75 395 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 PPP1R14BQ96C90 147 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 IL1RAPQ9NPH3 570 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 SLCO3A1Q9UIG8 710 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 CCDC159P0C7I6 412 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 GABRR2P28476 465 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 RRM2P31350 389 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 GABARAPL2P60520 117 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 MVKQ03426 396 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 NAE1Q13564 534 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 RFX4Q33E94 735 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 CATSPEREQ5SY80 951 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 LILRA3Q8N6C8 439 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-221ENST00000640341 OR4K1Q8NGD4 311 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 RAET1EQ8TD07 263 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 LGALS12Q96DT0 336 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 CNDP2Q96KP4 475 aaKnown RBP14.15□□□□□ -0.14
SCARB2-221ENST00000640341 CWH43Q9H720 699 aa14.15□□□□□ -0.14
SCARB2-221ENST00000640341 ZNF334Q9HCZ1 680 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-221ENST00000640341 CHD5Q8TDI0 1954 aa14.15□□□□□ -0.15
SCARB2-221ENST00000640341 TRBV5-3A0A0A0MS03 114 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms