RNA–Protein interactions for RNA: ENST00000639481.1

CROCCP2-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best) BASIC

Gene CROCCP2, Length 1,296 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-205ENST00000639481 ICE2Q659A1 982 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 ZNF425Q6IV72 752 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 RP1L1Q8IWN7 2480 aaPredicted RBP18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 ARHGEF39Q8N4T4 335 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 COL26A1Q96A83 441 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 NACC2Q96BF6 587 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 SNRNP40Q96DI7 357 aaKnown RBP18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 KCNF1Q9H3M0 494 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 ZNF304Q9HCX3 659 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 ATP13A2Q9NQ11 1180 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 KLHL42Q9P2K6 505 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 FBXO5Q9UKT4 447 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 B3GNT3Q9Y2A9 372 aa18.36■□□□□ 0.53
CROCCP2-205ENST00000639481 BLACEA4D250 179 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 RPA3P35244 121 aaPredicted RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 FNTAP49354 379 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 PRDX1Q06830 199 aaKnown RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 KLC1Q07866 573 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 Q0VFX4 171 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 TSTA3Q13630 321 aaPredicted RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 HKDC1Q2TB90 917 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 MSS51Q4VC12 460 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 HSP90AA5PQ58FG0 334 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 CRB2Q5IJ48 1285 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 PRAMEF13Q5VWM6 474 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 PIWIL4Q7Z3Z4 852 aaKnown RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 LAPTM4BQ86VI4 370 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 PPIL6Q8IXY8 311 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 CPNE9Q8IYJ1 553 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 FBXO15Q8NCQ5 510 aaPredicted RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 STT3BQ8TCJ2 826 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 OR2A5Q96R48 311 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 AARSD1Q9BTE6 412 aaKnown RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 FAM114A2Q9NRY5 505 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 CUEDC1Q9NWM3 386 aaPredicted RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 SNX12Q9UMY4 172 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 RUVBL1Q9Y265 456 aaKnown RBP18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 NAV2Q8IVL1 2488 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 HIVEP3Q5T1R4 2406 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 ICE1Q9Y2F5 2266 aa18.35■□□□□ 0.53
CROCCP2-205ENST00000639481 FFAR3O14843 346 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 GPR42O15529 346 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 SEMA7AO75326 666 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 ZGLP1P0C6A0 271 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 MPC1LP0DKB6 136 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 ITGA3P26006 1051 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 GABRB3P28472 473 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 IMPA1P29218 277 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 SKIV2L2P42285 1042 aaKnown RBP18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 TTLL9Q3SXZ7 439 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 VWA2Q5GFL6 755 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 Q6ZS92 163 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 PRSS58Q8IYP2 241 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 OR11G2Q8NGC1 345 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 PLAC1Q9HBJ0 212 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 SEMA3GQ9NS98 782 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 IARS2Q9NSE4 1012 aaKnown RBP18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 ASF1BQ9NVP2 202 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 NXT1Q9UKK6 140 aaKnown RBP18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 NTNG1Q9Y2I2 539 aa18.34■□□□□ 0.53
CROCCP2-205ENST00000639481 IGLV3-12A0A075B6K2 115 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 SMAPO00193 183 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 P2RX6O15547 441 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 SYF2O95926 243 aaKnown RBP18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 ALPPP05187 535 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 EFNA3P52797 238 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 CRYMQ14894 314 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 MUM1Q2TAK8 710 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 EIF2S3LQ2VIR3 472 aaKnown RBP18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 TUBB8Q3ZCM7 444 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 PRMT9Q6P2P2 845 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 CUZD1Q86UP6 607 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 KCNMB4Q86W47 210 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 PLD3Q8IV08 490 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 IGDCC3Q8IVU1 814 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 PARP9Q8IXQ6 854 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 SHISA5Q8N114 240 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 CISD2Q8N5K1 135 aaKnown RBP18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 AMER2Q8N7J2 671 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 AMER3Q8N944 861 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 C2CD4AQ8NCU7 369 aaPredicted RBP18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 GRK7Q8WTQ7 553 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 CABS1Q96KC9 395 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 NDNQ99608 321 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 CRB3Q9BUF7 120 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 DDX47Q9H0S4 455 aaKnown RBP18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 CCDC68Q9H2F9 335 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 ABCF3Q9NUQ8 709 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 ADAMTS6Q9UKP5 1117 aa18.33■□□□□ 0.52
CROCCP2-205ENST00000639481 HAT1O14929 419 aa18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 FOXS1O43638 330 aa18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 ERVK-10P10266 1014 aa18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 GP1BBP13224 206 aa18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 ENO3P13929 434 aaPredicted RBP18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 IVDP26440 423 aa18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 DHX9Q08211 1270 aaKnown RBP18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 NAA25Q14CX7 972 aa18.32■□□□□ 0.52
CROCCP2-205ENST00000639481 RBBP7Q16576 425 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms