RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SLC6A20Q9NP91 592 aa17.59■□□□□ 0.41
CLN6-214ENST00000636314 CUTCQ9NTM9 273 aa17.59■□□□□ 0.41
CLN6-214ENST00000636314 SLC17A6Q9P2U8 582 aa17.59■□□□□ 0.41
CLN6-214ENST00000636314 TAC3Q9UHF0 121 aa17.59■□□□□ 0.41
CLN6-214ENST00000636314 TEX264Q9Y6I9 313 aa17.59■□□□□ 0.41
CLN6-214ENST00000636314 CCDC88CQ9P219 2028 aa17.59■□□□□ 0.41
CLN6-214ENST00000636314 OR2A25A4D2G3 310 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 GFYI3L273 518 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 DSCR3O14972 297 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 SRPX2O60687 465 aaPredicted RBP17.58■□□□□ 0.4
CLN6-214ENST00000636314 KLF7O75840 302 aaPredicted RBP17.58■□□□□ 0.4
CLN6-214ENST00000636314 GABRB3P28472 473 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 SKIV2L2P42285 1042 aaKnown RBP17.58■□□□□ 0.4
CLN6-214ENST00000636314 YBX1P67809 324 aaKnown RBP17.58■□□□□ 0.4
CLN6-214ENST00000636314 FRMPD2BQ6IN97 320 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 CYHR1Q6ZMK1 362 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 GALNT7Q86SF2 657 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 MYO1HQ8N1T3 1032 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 ZNF285Q96NJ3 590 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 ZFYVE21Q9BQ24 234 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 PLAC1Q9HBJ0 212 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 ABCF3Q9NUQ8 709 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 MAP10Q9P2G4 905 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 MAP4K5Q9Y4K4 846 aa17.58■□□□□ 0.4
CLN6-214ENST00000636314 HEATR5BQ9P2D3 2071 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 E7ENX8 843 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 AHSGP02765 367 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 RNF224P0DH78 156 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 PIM1P11309 404 aaPredicted RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 RPL21P46778 160 aaKnown RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 RRADP55042 308 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 TAP2Q03519 686 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 PDIA2Q13087 525 aaKnown RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 ATP1A4Q13733 1029 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 WASHC2DQ5SRD0 308 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 TEDDM1Q5T9Z0 273 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 THEMIS2Q5TEJ8 643 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 ICE2Q659A1 982 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 STEAP4Q687X5 459 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 MRPL14Q6P1L8 145 aaKnown RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 TRMT10BQ6PF06 316 aaKnown RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 MRGPREQ86SM8 312 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 ANKMY2Q8IV38 441 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 PALM2Q8IXS6 379 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 C17orf53Q8N3J3 647 aaPredicted RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 GPATCH11Q8N954 259 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 OR2Y1Q8NGV0 311 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 EEF1AKMT1Q8WVE0 214 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 FKBP10Q96AY3 582 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 PLCD4Q9BRC7 762 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 ENAMQ9NRM1 1142 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 UTP6Q9NYH9 597 aaKnown RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 CORO1CQ9ULV4 474 aaPredicted RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 SNX24Q9Y343 169 aa17.57■□□□□ 0.4
CLN6-214ENST00000636314 PCDHGA9Q9Y5G4 932 aaKnown RBP17.57■□□□□ 0.4
CLN6-214ENST00000636314 FITM1A5D6W6 292 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 SORBS2O94875 1100 aaKnown RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 EIF2S1P05198 315 aaKnown RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 C8GP07360 202 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 IMPA1P29218 277 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 CASQ1P31415 396 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 CDKN2DP55273 166 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 TIAL1Q01085 375 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLN6-214ENST00000636314 PRDX1Q06830 199 aaKnown RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 SP140Q13342 867 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 PDAP1Q13442 181 aaKnown RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 SSPNQ14714 243 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 FAM214AQ32MH5 1076 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 PAQR3Q6TCH7 311 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 MED25Q71SY5 747 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 ADCK2Q7Z695 626 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 METTL27Q8N6F8 245 aaPredicted RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 TMEM102Q8N9M5 508 aaPredicted RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 BBOF1Q8ND07 529 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 FBXO36Q8NEA4 188 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 MCOLN3Q8TDD5 553 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 LINGO1Q96FE5 620 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 IP6K3Q96PC2 410 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 CCDC177Q9NQR7 707 aaPredicted RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 SLC22A11Q9NSA0 550 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 CUEDC1Q9NWM3 386 aaPredicted RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 LUZP4Q9P127 313 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 ZFATQ9P243 1243 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 G3BP2Q9UN86 482 aaKnown RBP17.56■□□□□ 0.4
CLN6-214ENST00000636314 ZNF451Q9Y4E5 1061 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 NUP210LQ5VU65 1888 aa17.56■□□□□ 0.4
CLN6-214ENST00000636314 PCSK5Q92824 1860 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 ITPR2Q14571 2701 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 LOC105369274A0A096LPK9 316 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 LOC102723532A0A0G2JNH3 316 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 HYKKA2RU49 373 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 FAM187AA6NFU0 413 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 TP73O15350 636 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 CNOT3O75175 753 aaKnown RBP17.55■□□□□ 0.4
CLN6-214ENST00000636314 ITGAXP20702 1163 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 ABATP80404 500 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 MRPS25P82663 173 aaKnown RBP17.55■□□□□ 0.4
CLN6-214ENST00000636314 C2orf54Q08AI8 447 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 CALCOCO2Q13137 446 aa17.55■□□□□ 0.4
CLN6-214ENST00000636314 FASTKD3Q14CZ7 662 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms