RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	IVD	P26440	423 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DSC1	Q08554	894 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SCAP	Q12770	1279 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF789	Q5FWF6	425 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MLIP	Q5VWP3	458 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CEP97	Q8IW35	865 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PGAM4	Q8N0Y7	254 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	C10orf82	Q8WW14	230 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TUBGCP5	Q96RT8	1024 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	BOC	Q9BWV1	1114 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	NFS1	Q9Y697	457 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DDX60	Q8IY21	1712 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SCN4A	P35499	1836 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MAGEB17	A8MXT2	336 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	NDUFS4	O43181	175 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SAG	P10523	405 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	POLR2C	P19387	275 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	BMP8B	P34820	402 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	THOC6	Q86W42	341 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	UBR7	Q8N806	425 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	AVL9	Q8NBF6	648 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	POLR1B	Q9H9Y6	1135 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ALKBH4	Q9NXW9	302 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	APOBEC3B	Q9UH17	382 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OR1A2	Q9Y585	309 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MID1	O15344	667 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	UQCRB	P14927	111 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	AGXT	P21549	392 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RPL5	P46777	297 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CENPI	Q92674	756 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TRIM8	Q9BZR9	551 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	FBRS	Q9HAH7	460 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997		A6NHS1	94 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RNGTT	O60942	597 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TBX10	O75333	385 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	JUN	P05412	331 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PRPS2	P11908	318 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CD68	P34810	354 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CDC42	P60953	191 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RPS21	P63220	83 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ID2	Q02363	134 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	NDUFA9	Q16795	377 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CRTC1	Q6UUV9	634 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OR52L1	Q8NGH7	329 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	GLYATL1	Q969I3	302 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MAGEL2	Q9UJ55	1249 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SPO11	Q9Y5K1	396 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	THEGL	P0DJG4	465 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	HOXD8	P13378	290 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SLC6A4	P31645	630 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DIO3	P55073	304 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CSNK2B	P67870	215 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MRPS15	P82914	257 aa	Known RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TCEAL1	Q15170	157 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ANKRD26P1	Q6NSI1	321 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OR8H2	Q8N162	312 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DOK4	Q8TEW6	326 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	NLE1	Q9NVX2	485 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	POMP	Q9Y244	141 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DOCK2	Q92608	1830 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PFKL	P17858	780 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PPIB	P23284	216 aa	Known RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	IL4R	P24394	825 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	HOXA9	P31269	272 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	AP1S2	P56377	157 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ERVK-8	P63133	956 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SIM1	P81133	766 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PCLAF	Q15004	111 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TSSK4	Q6SA08	328 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	UTS2B	Q765I0	119 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SLC44A3	Q8N4M1	653 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SUN3	Q8TAQ9	357 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	KCNJ9	Q92806	393 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TP53INP1	Q96A56	240 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	KIAA1191	Q96A73	305 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OSBPL10	Q9BXB5	764 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RBCK1	Q9BYM8	510 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PRDM6	Q9NQX0	595 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MARCH5	Q9NX47	278 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PDP1	Q9P0J1	537 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ABI3	Q9P2A4	366 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CACNA1H	O95180	2353 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MYOCOS	A0A1B0GUC4	107 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997		A0A1W2PRB8	838 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997		A6NCN8	305 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	BBIP1	A8MTZ0	92 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TSPAN19	P0C672	248 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ITGA2	P17301	1181 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	STXBP1	P61764	594 aa	Known RBP	13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	FOLH1	Q04609	750 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SIGLEC14	Q08ET2	396 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	KIAA1211L	Q6NV74	962 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TMIGD1	Q6UXZ0	262 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CBR4	Q8N4T8	237 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SMPDL3A	Q92484	453 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ART5	Q96L15	291 aa		13.92	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CEP295NL	Q96MC4	621 aa		13.92	□□□□□ -0.18

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