RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 HOXC11O43248 304 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 MFN2O95140 757 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 GPX2P18283 190 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 GJA5P36382 358 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 CDKN2CP42773 168 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 GDF5P43026 501 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 RGS6P49758 472 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 MRPS15P82914 257 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 CAMK2BQ13554 666 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 VEZF1Q14119 521 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 ZFP69Q49AA0 526 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 C5orf22Q49AR2 442 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 PRAMEF19Q5SWL8 479 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 ATAD3CQ5T2N8 411 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 NADSYN1Q6IA69 706 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 ZNF551Q7Z340 670 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 DEPDC4Q8N2C3 294 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 CPA6Q8N4T0 437 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 OR7D4Q8NG98 312 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 C9orf43Q8TAL5 461 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 GGHQ92820 318 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 FBXO32Q969P5 355 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 CEP19Q96LK0 163 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 APOL5Q9BWW9 433 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 ACPTQ9BZG2 426 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 MIR1-1HGQ9H1L0 117 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 MARCH7Q9H992 704 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 DDX28Q9NUL7 540 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 TRMT13Q9NUP7 481 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 QPCTLQ9NXS2 382 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 CPA4Q9UI42 421 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 DLGAP4Q9Y2H0 992 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 PLXNA3P51805 1871 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 TLL1O43897 1013 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 EPN2O95208 641 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 KCNK5O95279 499 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 ACPPP15309 386 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 DDOSTP39656 456 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 ARPC4P59998 168 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 DUOXA1Q1HG43 343 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 ARMCX4Q5H9R4 360 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 NEK5Q6P3R8 708 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 TMC5Q6UXY8 1006 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 VTCN1Q7Z7D3 282 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 STX19Q8N4C7 294 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 SIMC1Q8NDZ2 872 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 EXOC2Q96KP1 924 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 CDK5RAP1Q96SZ6 601 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 RDH14Q9HBH5 336 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 PCDHGC4Q9Y5F7 938 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 A0A075B6Q4 140 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CAPN5O15484 640 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 ITGB1P05556 798 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 PRPH2P23942 346 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CXCR2P25025 360 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SLC19A1P41440 591 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 KIR3DL1P43629 444 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 GPR153Q6NV75 609 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 GALNT6Q8NCL4 622 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 DENND6BQ8NEG7 585 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 MYEOVQ96EZ4 313 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 DHRS1Q96LJ7 313 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SMIM14Q96QK8 99 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 HHIPQ96QV1 700 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SLC30A2Q9BRI3 323 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SPATA9Q9BWV2 254 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 OR51E2Q9H255 320 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SIRT5Q9NXA8 310 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 ACTL7AQ9Y615 435 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 AOC2O75106 756 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 STK16O75716 305 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 TRAPPC2P0DI81 140 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 TRAPPC2BP0DI82 140 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 ADORA3P0DMS8 318 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 ENGP17813 658 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 GPR15P49685 360 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CDH4P55283 916 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SLC14A1Q13336 389 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CDK10Q15131 360 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 ZNF367Q7RTV3 350 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 ZNF605Q86T29 641 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SAPCD2Q86UD0 394 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 RBFAQ8N0V3 343 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CFAP52Q8N1V2 620 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SELENOMQ8WWX9 145 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CMTM7Q96FZ5 175 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 TSSK3Q96PN8 268 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CHCHD6Q9BRQ6 235 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 GPRC5BQ9NZH0 403 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 IL17CQ9P0M4 197 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 TBC1D14Q9P2M4 693 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 PPT2Q9UMR5 302 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 SNX6Q9UNH7 406 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 CAB39Q9Y376 341 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 PCDHB5Q9Y5E4 795 aa14.37□□□□□ -0.11
CACNA1A-220ENST00000635988 TTC3P53804 2025 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 GUCY1B2O75343 617 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 UGT2B17O75795 530 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms