RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 GDF5P43026 501 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 RAB15P59190 212 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 PTSQ03393 145 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 KCNC4Q03721 635 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 LMAN2Q12907 356 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 DCTN2Q13561 401 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 KCNC3Q14003 757 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 PLEKHS1Q5SXH7 462 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CES5AQ6NT32 575 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SERPINA11Q86U17 422 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ITIH5Q86UX2 942 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 RGL4Q8IZJ4 473 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 FAM86B1Q8N7N1 296 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 BEND7Q8N7W2 519 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 NUDT8Q8WV74 236 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 TANKQ92844 425 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CLP1Q92989 425 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 FKBP10Q96AY3 582 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CMTM7Q96FZ5 175 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 REXO5Q96IC2 774 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ZNF641Q96N77 438 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SAMD11Q96NU1 681 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 BCL7BQ9BQE9 202 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ATP13A3Q9H7F0 1226 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 C1orf109Q9NX04 203 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 OPTCQ9UBM4 332 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 EBF1Q9UH73 591 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 HCFC2Q9Y5Z7 792 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 NPIPB15A6NHN6 443 aaPredicted RBP6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 PTGES3LE9PB15 166 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 TGM5O43548 720 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 SEC22BO75396 215 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 CLDN7O95471 211 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 THRBP10828 461 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 PCMT1P22061 227 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 NR4A1P22736 598 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 STT3AP46977 705 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 PXNP49023 591 aaPredicted RBP6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 PHEXP78562 749 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 BCL2L1Q07817 233 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 CHRNA6Q15825 494 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 IQCCQ4KMZ1 466 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 MPPE1Q53F39 396 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 ZNF551Q7Z340 670 aaPredicted RBP6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 MICU2Q8IYU8 434 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 ZCCHC7Q8N3Z6 543 aaKnown RBP6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 OR2T12Q8NG77 320 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 OR2AP1Q8NGE2 309 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 ING5Q8WYH8 240 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 SMG7Q92540 1137 aaKnown RBP6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 AMBRA1Q9C0C7 1298 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 ASB8Q9H765 288 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 BRD9Q9H8M2 597 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 LRTM1Q9HBL6 345 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC6A13Q9NSD5 602 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 FAM118AQ9NWS6 357 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 PDE10AQ9Y233 779 aa6.96□□□□□ -1.29
CTNNA1-244ENST00000627109 SOBPA7XYQ1 873 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 MRPS14O60783 128 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 CLDN9O95484 217 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 ABCB1P08183 1280 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 BCKDHAP12694 445 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 SRCP12931 536 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 CCR7P32248 378 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 EPHB3P54753 998 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 ABRQ12979 859 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 DDX39BQ13838 428 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 GTF2H3Q13889 308 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 PTGR1Q14914 329 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 CPSF6Q16630 551 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 ZNF691Q5VV52 312 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 EID3Q8N140 333 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 OR10Q1Q8NGQ4 319 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 SIGLEC11Q96RL6 698 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 SPATA9Q9BWV2 254 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 HPS4Q9NQG7 708 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 FARSBQ9NSD9 589 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 GALNT8Q9NY28 637 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 IFT80Q9P2H3 777 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 BAG5Q9UL15 447 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 HSPE1-MOB4S4R3N1 261 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 TNRC18O15417 2968 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 A0A0J9YVX5 310 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 C1orf232A0A0U1RR37 186 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 ELOVL7A1L3X0 281 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 MYO1GB0I1T2 1018 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 LOC730098B7Z3J9 87 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 PRAMEF4O60810 478 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 ATE1O95260 518 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 IGSF6O95976 241 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 GSNP06396 782 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 C1SP09871 688 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 JUNDP17535 347 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 UGT1A1P22309 533 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 UGT1A4P22310 534 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 LHCGRP22888 699 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 AKT1P31749 480 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 UGT1A3P35503 534 aa6.96□□□□□ -1.3
CTNNA1-244ENST00000627109 UGT1A5P35504 534 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms