RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 PYROXD1Q8WU10 500 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 EEF1AKMT1Q8WVE0 214 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 ATL1Q8WXF7 558 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 CDKL2Q92772 493 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 THAP11Q96EK4 314 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 VPS39Q96JC1 886 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PWWP2AQ96N64 755 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 NDNQ99608 321 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 RHOJQ9H4E5 214 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 MLXIPLQ9NP71 852 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 CCDC177Q9NQR7 707 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 CUTCQ9NTM9 273 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 IRAK4Q9NWZ3 460 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 GRHL1Q9NZI5 618 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 NDOR1Q9UHB4 597 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 GPN3Q9UHW5 284 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 CDC23Q9UJX2 597 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PDE10AQ9Y233 779 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 POLEQ07864 2286 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 KCNE1BA0A087WTH5 132 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 IGKV1-8A0A0C4DH67 115 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 KIF2AO00139 706 aaPredicted RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 KLHL41O60662 606 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 CEACAM4O75871 244 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 PLA2G2AP14555 144 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 ZNF37AP17032 561 aaPredicted RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 FASTKD3Q14CZ7 662 aaKnown RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 WHAMMP3Q1A5X7 153 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 MUM1Q2TAK8 710 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 PRTGQ2VWP7 1150 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 LACTB2Q53H82 288 aaPredicted RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 WASHC2DQ5SRD0 308 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 FBXO42Q6P3S6 717 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 SUSD1Q6UWL2 747 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 OVCH1Q7RTY7 1134 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 FAM20CQ8IXL6 584 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 NKAPQ8N5F7 415 aaKnown RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 GPATCH11Q8N954 259 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 PTERQ96BW5 349 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 LINGO1Q96FE5 620 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 ABHD17AQ96GS6 310 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 OR2A5Q96R48 311 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 RUFY1Q96T51 708 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 SGPP1Q9BX95 441 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 TRIM54Q9BYV2 358 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 SLC6A20Q9NP91 592 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 TMEM184CQ9NVA4 438 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 SCN3AQ9NY46 2000 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 STOX2Q9P2F5 926 aaPredicted RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 IFT80Q9P2H3 777 aaPredicted RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 DHCR7Q9UBM7 475 aaKnown RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 TAC3Q9UHF0 121 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 HEMK1Q9Y5R4 338 aaPredicted RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 ESPL1Q14674 2120 aa11.9□□□□□ -0.5
LINC00963-217ENST00000624009 TNRC6AQ8NDV7 1962 aaKnown RBP11.9□□□□□ -0.5
LINC00963-217ENST00000624009 SVILO95425 2214 aa11.9□□□□□ -0.51
LINC00963-217ENST00000624009 SETXQ7Z333 2677 aaKnown RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 HYKKA2RU49 373 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 KRT87PA6NCN2 255 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 PABPN1LA6NDY0 278 aaKnown RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 PCDH17O14917 1159 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 SUV39H1O43463 412 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 SYF2O95926 243 aaKnown RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 F7P08709 466 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 FOLR3P41439 243 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 VSX2P58304 361 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 RPS15AP62244 130 aaKnown RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 RPS18P62269 152 aaKnown RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 TBPL1P62380 186 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 CDKL1Q00532 357 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 POU4F1Q01851 419 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 C2orf54Q08AI8 447 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 NFATC3Q12968 1075 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 FAM53BQ14153 422 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 HP1BP3Q5SSJ5 553 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 LCTLQ6UWM7 567 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 ATG14Q6ZNE5 492 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 CEP128Q6ZU80 1094 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 TTLL10Q6ZVT0 673 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 STRA8Q7Z7C7 330 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 RERGQ96A58 199 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 VPS50Q96JG6 964 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 CPNE1Q99829 537 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 HAUS8Q9BT25 410 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 SARGQ9BW04 601 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 ACAT2Q9BWD1 397 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 ING2Q9H160 280 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 G3BP2Q9UN86 482 aaKnown RBP11.89□□□□□ -0.51
LINC00963-217ENST00000624009 CDC14AQ9UNH5 594 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 PSAT1Q9Y617 370 aa11.89□□□□□ -0.51
LINC00963-217ENST00000624009 IGLV3-12A0A075B6K2 115 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 A0A0J9YVX5 310 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms