RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 GOLGA7Q7Z5G4 137 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 C17orf64Q86WR6 236 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CARFQ8N187 725 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CACTIN-AS1Q8N1I8 211 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 SNX31Q8N9S9 440 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 PPP4R1Q8TF05 950 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 NEIL2Q969S2 332 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 NSUN5Q96P11 429 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 DEPDC7Q96QD5 511 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 NUDT22Q9BRQ3 303 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 TRMOQ9BU70 441 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 ATXN7L1Q9ULK2 861 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 DYRK1BQ9Y463 629 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 KLK4Q9Y5K2 254 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 SNRNP200O75643 2136 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 FRYQ5TBA9 3013 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 A0A0J9YY10 115 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 TLCD2A6NGC4 264 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 NPHS1O60500 1241 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CSO75390 466 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 SERPINE1P05121 402 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 GRK2P25098 689 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 SERPINB5P36952 375 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CDH13P55290 713 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 GFERP55789 205 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CHI3L2Q15782 390 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 TRIM42Q8IWZ5 723 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 ABHD11Q8NFV4 315 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 RAB3IL1Q8TBN0 382 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 SLC5A11Q8WWX8 675 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 MOCOSQ96EN8 888 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CNDP1Q96KN2 507 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 TGM7Q96PF1 710 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 IPPKQ9H8X2 491 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 MRPS30Q9NP92 439 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 C1GALT1Q9NS00 363 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 SEMA5BQ9P283 1151 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 PDP2Q9P2J9 529 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 SH2B3Q9UQQ2 575 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 D6RAR5 112 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 MLYCDO95822 493 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 NEFHP12036 1026 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 HOXB3P14651 431 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 BGNP21810 368 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 HRH2P25021 359 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 LSSP48449 732 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 YBX1P67809 324 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 LCP2Q13094 533 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 E2F2Q14209 437 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 NAA25Q14CX7 972 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 ISXQ2M1V0 245 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 KIAA1614Q5VZ46 1190 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 SLCO4C1Q6ZQN7 724 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 ZCCHC23Q6ZST2 131 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 RPS27LQ71UM5 84 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 TRIM73Q86UV7 250 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 OR4D9Q8NGE8 314 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 PPP1R14CQ8TAE6 165 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 ZMYND15Q9H091 742 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 SEMA6CQ9H3T2 930 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 EHD1Q9H4M9 534 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 NOL11Q9H8H0 719 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 SEMA4BQ9NPR2 832 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 ACSS2Q9NR19 701 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 STK38LQ9Y2H1 464 aa19.08■□□□□ 0.64
PDLIM2-221ENST00000622702 IGKV1-8A0A0C4DH67 115 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 OR7A17O14581 309 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 TOX3O15405 576 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 GRIA3P42263 894 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 ZNF574Q6ZN55 896 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 FAM92BQ6ZTR7 304 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 TMPRSS9Q7Z410 1059 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 PRSS42Q7Z5A4 293 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 FAM20CQ8IXL6 584 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 TRPC4APQ8TEL6 797 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 DYDC1Q8WWB3 177 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 WDR34Q96EX3 536 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 PPM1MQ96MI6 270 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 ZNF382Q96SR6 550 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 MAP3K3Q99759 626 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 NTMT1Q9BV86 223 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 DRC3Q9H069 523 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 PELI2Q9HAT8 420 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 SLC6A20Q9NP91 592 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 CUEDC1Q9NWM3 386 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 TMEM9Q9P0T7 183 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 ANKMY1Q9P2S6 941 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 HEATR5BQ9P2D3 2071 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 KNTC1P50748 2209 aa19.07■□□□□ 0.64
PDLIM2-221ENST00000622702 TMEM114B3SHH9 223 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 E7EQ34 232 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 KLF11O14901 512 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 CLGNO14967 610 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 KIF1CO43896 1103 aaKnown RBP19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 UGDHO60701 494 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 PRAMEF4O60810 478 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 WFS1O76024 890 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 OTCP00480 354 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 CDH1P12830 882 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 CDH3P22223 829 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms