RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SOCS2O14508 198 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 INPPL1O15357 1258 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 ITGB1P05556 798 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 CRB2Q5IJ48 1285 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 AGTRAPQ6RW13 159 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 LRRTM3Q86VH5 581 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 TTC9BQ8N6N2 239 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 CCM2Q9BSQ5 444 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 B4GALT6Q9UBX8 382 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 SPIN1Q9Y657 262 aaPredicted RBP15.71■□□□□ 0.11
GABRB3-215ENST00000622697 IRGMA1A4Y4 181 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 PRORSD1PA6NEY8 169 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 PTNP21246 168 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 PSMD4P55036 377 aaKnown RBP15.71■□□□□ 0.11
GABRB3-215ENST00000622697 TAS2R50P59544 299 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 RPL26P61254 145 aaKnown RBP15.71■□□□□ 0.11
GABRB3-215ENST00000622697 MS4A2Q01362 244 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 ABRAXAS2Q15018 415 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 KLHL35Q6PF15 583 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 Q6ZVL8 140 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 CYS1Q717R9 158 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 CNIH3Q8TBE1 160 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 PCDHGA4Q9Y5G9 962 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 SMIM30A4D0T7 59 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 MMP20O60882 483 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 CNMDO75829 334 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 ALAS2P22557 587 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 HNF1BP35680 557 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 XKP51811 444 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 PRAMEF14Q5SWL7 426 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 PRAMEF13Q5VWM6 474 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 HDDC3Q8N4P3 179 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.71■□□□□ 0.11
GABRB3-215ENST00000622697 SRFBP1Q8NEF9 429 aaKnown RBP15.71■□□□□ 0.11
GABRB3-215ENST00000622697 TMEM98Q9Y2Y6 226 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 LAMA4Q16363 1823 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 K7ERQ8 282 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 EPOP01588 193 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 RPS3AP61247 264 aaKnown RBP15.71■□□□□ 0.11
GABRB3-215ENST00000622697 SCN1BQ07699 218 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 NEK5Q6P3R8 708 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 FAM92BQ6ZTR7 304 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 MOSPD2Q8NHP6 518 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 RASSF5Q8WWW0 418 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 ARNTL2Q8WYA1 636 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 ISOC1Q96CN7 298 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 IL12RB2Q99665 862 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 MRPS30Q9NP92 439 aaKnown RBP15.71■□□□□ 0.11
GABRB3-215ENST00000622697 ADAMTS5Q9UNA0 930 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 KIF13AQ9H1H9 1805 aa15.71■□□□□ 0.11
GABRB3-215ENST00000622697 CHST10O43529 356 aa15.71■□□□□ 0.1
GABRB3-215ENST00000622697 PNLIPRP1P54315 467 aa15.71■□□□□ 0.1
GABRB3-215ENST00000622697 SCAPQ12770 1279 aa15.71■□□□□ 0.1
GABRB3-215ENST00000622697 NFATC2Q13469 925 aa15.71■□□□□ 0.1
GABRB3-215ENST00000622697 ZNF461Q8TAF7 563 aa15.71■□□□□ 0.1
GABRB3-215ENST00000622697 IPCEF1Q8WWN9 437 aaPredicted RBP15.71■□□□□ 0.1
GABRB3-215ENST00000622697 ADAP2Q9NPF8 381 aa15.71■□□□□ 0.1
GABRB3-215ENST00000622697 DHRS7Q9Y394 339 aa15.71■□□□□ 0.1
GABRB3-215ENST00000622697 FABP12A6NFH5 140 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ARHGEF33A8MVX0 844 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 C6orf47O95873 294 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 SLC35G6P0C7Q6 338 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ZNF8P17098 575 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-215ENST00000622697 AP1S2P56377 157 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ATP13A5Q4VNC0 1218 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 KHDRBS2Q5VWX1 349 aaKnown RBP15.7■□□□□ 0.1
GABRB3-215ENST00000622697 OXR1Q8N573 874 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 SNX33Q8WV41 574 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 S100A13Q99584 98 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 SLC29A3Q9BZD2 475 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ELL3Q9HB65 397 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-215ENST00000622697 MSRAQ9UJ68 235 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 MKL2Q9ULH7 1088 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 GPC6Q9Y625 555 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-215ENST00000622697 C2orf78A6NCI8 922 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 SLC22A1O15245 554 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 KELP23276 732 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ATP4BP51164 291 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 OR4D2P58180 307 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ADAM17P78536 824 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 CDK6Q00534 326 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 C22orf39Q6P5X5 142 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 C7orf57Q8NEG2 295 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 PDCD10Q9BUL8 212 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 DPEP2Q9H4A9 486 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 UBE2QL1A1L167 161 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 MCIDASD6RGH6 385 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 POP7O75817 140 aaKnown RBP15.7■□□□□ 0.1
GABRB3-215ENST00000622697 NXPE1Q8N323 547 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 GRID2O43424 1007 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 HLA-EP13747 358 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 CDKN1CP49918 316 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-215ENST00000622697 CLCNKAP51800 687 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 DNASE1L3Q13609 305 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 C2orf27AQ580R0 203 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 PSKH2Q96QS6 385 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ZNF382Q96SR6 550 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 SORT1Q99523 831 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 ZSCAN5AQ9BUG6 496 aa15.7■□□□□ 0.1
GABRB3-215ENST00000622697 CCM2LQ9NUG4 571 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms