RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 GPR132Q9UNW8 380 aa4.49□□□□□ -1.69
CPNE3-213ENST00000622183 KNSTRNQ9Y448 316 aa4.49□□□□□ -1.69
CPNE3-213ENST00000622183 ACEP12821 1306 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 ILVBLA1L0T0 632 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 C2CD4DB7Z1M9 353 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 DDX39AO00148 427 aaKnown RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 BUB3O43684 328 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 MOCS2O96007 188 aaPredicted RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 APOHP02749 345 aaPredicted RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 ATP1A1P05023 1023 aaKnown RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 UROSP10746 265 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 PAX1P15863 534 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 AMD1P17707 334 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 CSTF2P33240 577 aaKnown RBP eCLIP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 DCTP40126 519 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 NPBWR1P48145 328 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 POU3F1Q03052 451 aaPredicted RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 AP1B1Q10567 949 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 TEFQ10587 303 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 SLC35D3Q5M8T2 416 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 PODNL1Q6PEZ8 512 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 TMEM270Q6UE05 265 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 ZNF771Q7L3S4 317 aaPredicted RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 ISCA2Q86U28 154 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 MEX3DQ86XN8 651 aaKnown RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 ZNF383Q8NA42 475 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 TSACCQ96A04 125 aaPredicted RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 CCDC3Q9BQI4 270 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 MTMR12Q9C0I1 747 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 SLC5A7Q9GZV3 580 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 PHPT1Q9NRX4 125 aaPredicted RBP4.48□□□□□ -1.69
CPNE3-213ENST00000622183 FLRT3Q9NZU0 649 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 PCDHGA1Q9Y5H4 931 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 KLK4Q9Y5K2 254 aa4.48□□□□□ -1.69
CPNE3-213ENST00000622183 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 A0A0B4J203 849 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 C17orf105B2RV13 164 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 TMEM150CB9EJG8 249 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 PRSS46E5RG02 174 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 SLC22A2O15244 555 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 BAG3O95817 575 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 PNPP00491 289 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 F7P08709 466 aaPredicted RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 FRMD6-AS1P0C7T7 363 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 HLA-DPA1P20036 260 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 GLIPR1P48060 266 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 ADARP55265 1226 aaKnown RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 IL10RBQ08334 325 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 TRAP1Q12931 704 aaKnown RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 LASP1Q14847 261 aaKnown RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 HERC3Q15034 1050 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 ZC2HC1CQ53FD0 456 aaPredicted RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 PDLIM3Q53GG5 364 aaPredicted RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 XKR3Q5GH77 459 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 WDR38Q5JTN6 314 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 FAM46CQ5VWP2 391 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 GPR141Q7Z602 305 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 CIARTQ8N365 385 aaPredicted RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 KLHDC9Q8NEP7 349 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 UBLCP1Q8WVY7 318 aaPredicted RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 BCL2L2Q92843 193 aaPredicted RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 ALG14Q96F25 216 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 TRMT61BQ9BVS5 477 aaKnown RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 ACAT2Q9BWD1 397 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 SDCBP2Q9H190 292 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 CPVLQ9H3G5 476 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 ZFP57Q9NU63 452 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 P4HTMQ9NXG6 502 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 RUVBL2Q9Y230 463 aaKnown RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 CHKBQ9Y259 395 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 HBS1LQ9Y450 684 aaKnown RBP4.47□□□□□ -1.69
CPNE3-213ENST00000622183 RIPK3Q9Y572 518 aa4.47□□□□□ -1.69
CPNE3-213ENST00000622183 C13orf42A0A1B0GVH6 325 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 TTI1O43156 1089 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 KERAO60938 352 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 NME6O75414 186 aaPredicted RBP4.46□□□□□ -1.7
CPNE3-213ENST00000622183 RAD51DO75771 328 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 PIK3R1P27986 724 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 OR3A1P47881 315 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 KIAA1024LP59773 190 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 ERVFC1-1P60608 527 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 HERV-K104P61576 105 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 ARHGAP1Q07960 439 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 RPA4Q13156 261 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 C20orf194Q5TEA3 1177 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 GDPD4Q6W3E5 623 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 ANKRD46Q86W74 232 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 CCDC83Q8IWF9 413 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 CHCHD4Q8N4Q1 142 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 LMNTD1Q8N9Z9 388 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 CCDC63Q8NA47 563 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 CKAP2Q8WWK9 683 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF354BQ96LW1 612 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 NDNQ99608 321 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 BICC1Q9H694 974 aaKnown RBP4.46□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF556Q9HAH1 456 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 RNPEPL1Q9HAU8 725 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 DONSONQ9NYP3 566 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms