RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 GRIK2Q13002 908 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 C6orf183Q5T699 404 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 NANOGP8Q6NSW7 305 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ADAMTSL4Q6UY14 1074 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ADCK2Q7Z695 626 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 NANOGQ9H9S0 305 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 VCX3AQ9NNX9 186 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 SH2B3Q9UQQ2 575 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 CA5BQ9Y2D0 317 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ST14Q9Y5Y6 855 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ZFC3H1O60293 1989 aaKnown RBP9.61□□□□□ -0.87
VTA1-205ENST00000620996 KCNE1BA0A087WTH5 132 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 MAGEB17A8MXT2 336 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 GSTA4O15217 222 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 DFNA5O60443 496 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 GMNNO75496 209 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 GBAP04062 536 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 PGRP06401 933 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 JAK1P23458 1154 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 MAPK9P45984 424 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ZFP36L2P47974 494 aaKnown RBP9.61□□□□□ -0.87
VTA1-205ENST00000620996 AQP4P55087 323 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 SELPLGQ14242 412 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 FGL2Q14314 439 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 TLR1Q15399 786 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 IER5LQ5T953 404 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 LIPJQ5W064 366 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ANKRD26P1Q6NSI1 321 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ISLR2Q6UXK2 745 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 AMIGO2Q86SJ2 522 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 KIAA2013Q8IYS2 634 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 L3MBTL4Q8NA19 623 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ZBTB8BQ8NAP8 495 aaPredicted RBP9.61□□□□□ -0.87
VTA1-205ENST00000620996 RPLP0P6Q8NHW5 317 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 TMEM125Q96AQ2 219 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 NMD3Q96D46 503 aaKnown RBP9.61□□□□□ -0.87
VTA1-205ENST00000620996 FERD3LQ96RJ6 166 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 GPATCH1Q9BRR8 931 aaKnown RBP9.61□□□□□ -0.87
VTA1-205ENST00000620996 SLC17A9Q9BYT1 436 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 CD93Q9NPY3 652 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 CD300AQ9UGN4 299 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 GPR34Q9UPC5 381 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 NCKAP1Q9Y2A7 1128 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 PLEKHM1Q9Y4G2 1056 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 LRRC42Q9Y546 428 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 C2CD4DB7Z1M9 353 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 TIPRLO75663 272 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 B3GALT4O96024 378 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 MT-ND1P03886 318 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 PNLIPRP1P54315 467 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CLDN2P57739 230 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 RPS13P62277 151 aaKnown RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 GTDC1Q4AE62 458 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 SFT2D3Q587I9 215 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 NOXRED1Q6NXP6 359 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 OR2T34Q8NGX1 318 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 LRTOMTQ8WZ04 291 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CMTM7Q96FZ5 175 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 C12orf66Q96MD2 445 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 ZDHHC5Q9C0B5 715 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 VPS29Q9UBQ0 182 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CD207Q9UJ71 328 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 COL4A3Q01955 1670 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CCDC160A6NGH7 325 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 ARPC2O15144 300 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 ADAM23O75077 832 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 SDC1P18827 310 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 ADPRHP54922 357 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CYP4F2P78329 520 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 HIST2H2ACQ16777 129 aaPredicted RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 CYP51A1Q16850 503 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CNPY1Q3B7I2 92 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 GGTA1PQ4G0N0 100 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 USP39Q53GS9 565 aaKnown RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 TBCELQ5QJ74 424 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 HIST2H2AA3Q6FI13 130 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 MED27Q6P2C8 311 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 GALNT13Q8IUC8 556 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 C1orf52Q8N6N3 182 aaKnown RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 HUS1BQ8NHY5 278 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 FAM110BQ8TC76 370 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 HMGB4Q8WW32 186 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 SNX19Q92543 992 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 NCLNQ969V3 563 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 EME1Q96AY2 570 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 RAD51AP1Q96B01 352 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 AURKBQ96GD4 344 aaPredicted RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 NECTIN4Q96NY8 510 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 SEPHS2Q99611 448 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CGREF1Q99674 301 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 EFHD1Q9BUP0 239 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 C6orf203Q9P0P8 240 aaPredicted RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 MTCH2Q9Y6C9 303 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 LRRK1Q38SD2 2015 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 NPC1O15118 1278 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 KMOO15229 486 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CPSF4O95639 269 aaKnown RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 TGFB1P01137 390 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 SERPIND1P05546 499 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CDH1P12830 882 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms