RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SP140Q13342 867 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 IL11RAQ14626 422 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 PLCL1Q15111 1095 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 CYHR1Q6ZMK1 362 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 PRSS42Q7Z5A4 293 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 LCA5Q86VQ0 697 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 RASGRP3Q8IV61 690 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 DCUN1D3Q8IWE4 304 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 RBM12BQ8IXT5 1001 aaKnown RBP14.34□□□□□ -0.11
UBXN1-218ENST00000616865 TBC1D21Q8IYX1 336 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 TEX19Q8NA77 164 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 OR5AR1Q8NGP9 310 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 OR5K2Q8NHB8 316 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 ASB11Q8WXH4 323 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 RSC1A1Q92681 617 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 UBXN10Q96LJ8 280 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 TMBIM4Q9HC24 238 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.34□□□□□ -0.11
UBXN1-218ENST00000616865 DCDC2Q9UHG0 476 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 KCND3Q9UK17 655 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 RNF112Q9ULX5 631 aa14.34□□□□□ -0.11
UBXN1-218ENST00000616865 BLACEA4D250 179 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 CDC7O00311 574 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 GLRA3O75311 464 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 PSIP1O75475 530 aaKnown RBP14.33□□□□□ -0.12
UBXN1-218ENST00000616865 RASSF9O75901 435 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 WISP3O95389 354 aaPredicted RBP14.33□□□□□ -0.12
UBXN1-218ENST00000616865 C1orf105O95561 183 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 GSTA1P08263 222 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 FGF5P12034 268 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 CD1DP15813 335 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 AMD1P17707 334 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 GMPRP36959 345 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 MLLT10P55197 1068 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 GPS2Q13227 327 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 ACAP2Q15057 778 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 TSNQ15631 228 aaKnown RBP14.33□□□□□ -0.12
UBXN1-218ENST00000616865 ASB18Q6ZVZ8 466 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 GPSM1Q86YR5 675 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 CENPLQ8N0S6 344 aaPredicted RBP14.33□□□□□ -0.12
UBXN1-218ENST00000616865 STAG3L4Q8TBR4 150 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 ZFPM2Q8WW38 1151 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 EXT2Q93063 718 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 RAD51AP1Q96B01 352 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 ALKBH8Q96BT7 664 aaKnown RBP14.33□□□□□ -0.12
UBXN1-218ENST00000616865 ALG9Q9H6U8 611 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 PARVBQ9HBI1 364 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 IGSF5Q9NSI5 407 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 ZNF446Q9NWS9 450 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 LNPEPQ9UIQ6 1025 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 NOVA2Q9UNW9 492 aaKnown RBP14.33□□□□□ -0.12
UBXN1-218ENST00000616865 PCDHGA6Q9Y5G7 932 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 NBASA2RRP1 2371 aa14.33□□□□□ -0.12
UBXN1-218ENST00000616865 CDC14CA4D256 554 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 ARHGEF33A8MVX0 844 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 SUPT3HB4E1H0 165 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 GFYI3L273 518 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 MAP2K7O14733 419 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 ATP8B1O43520 1251 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 KIF1CO43896 1103 aaKnown RBP14.32□□□□□ -0.12
UBXN1-218ENST00000616865 KATNA1O75449 491 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 SUPT3HO75486 399 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 CREG1O75629 220 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 ENO2P09104 434 aaPredicted RBP14.32□□□□□ -0.12
UBXN1-218ENST00000616865 RBP1P09455 135 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 DLG1Q12959 904 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 DNASE1L3Q13609 305 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.32□□□□□ -0.12
UBXN1-218ENST00000616865 HSP90B2PQ58FF3 399 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 AGBL2Q5U5Z8 902 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 LCN9Q8WX39 176 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 KIAA1191Q96A73 305 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 APOPT1Q96IL0 206 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 EGFL8Q99944 293 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 TFB2MQ9H5Q4 396 aaKnown RBP14.32□□□□□ -0.12
UBXN1-218ENST00000616865 KIR3DX1Q9H7L2 352 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 SLC40A1Q9NP59 571 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 ARL15Q9NXU5 204 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 ADAMTS6Q9UKP5 1117 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 GRID1Q9ULK0 1009 aa14.32□□□□□ -0.12
UBXN1-218ENST00000616865 CCDC189A1A4V9 331 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 ZNF839A8K0R7 811 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 SYCE1LA8MT33 242 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 AGPSO00116 658 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 SPAG7O75391 227 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 SASH3O75995 380 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 RECKO95980 971 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 PDGFAP04085 211 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 CCNYL3P0C7X3 344 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 GPR18Q14330 331 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 CACHD1Q5VU97 1274 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 CYB5D1Q6P9G0 228 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 FAM92BQ6ZTR7 304 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 PPP1R3BQ86XI6 285 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 APLFQ8IW19 511 aaPredicted RBP14.31□□□□□ -0.12
UBXN1-218ENST00000616865 PLD6Q8N2A8 252 aaKnown RBP14.31□□□□□ -0.12
UBXN1-218ENST00000616865 OR9A1PQ8NGU1 263 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms