RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 IL2P60568 153 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 ARF3P61204 181 aaPredicted RBP12.12□□□□□ -0.47
CSTF1-208ENST00000613138 MEF2AQ02078 507 aaPredicted RBP12.12□□□□□ -0.47
CSTF1-208ENST00000613138 HKDC1Q2TB90 917 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 WASHC2DQ5SRD0 308 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 THEMIS2Q5TEJ8 643 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 MLIPQ5VWP3 458 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 ZNF425Q6IV72 752 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 RHBDD2Q6NTF9 364 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 AGTRAPQ6RW13 159 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 SBSNQ6UWP8 590 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 SHISA6Q6ZSJ9 500 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 RNF44Q7L0R7 432 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 ADCK2Q7Z695 626 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 CMC1Q7Z7K0 106 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 SLC26A11Q86WA9 606 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 CTAGE3PQ8IX95 158 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 RAB42Q8N4Z0 105 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 AMER2Q8N7J2 671 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 PPM1NQ8N819 430 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 IFT81Q8WYA0 676 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 SEC14L1Q92503 715 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 LRFN5Q96NI6 719 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 PRAP1Q96NZ9 151 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 PLCD4Q9BRC7 762 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 TRIM55Q9BYV6 548 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 PARVBQ9HBI1 364 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 SYTL2Q9HCH5 934 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
CSTF1-208ENST00000613138 PCDHGA6Q9Y5G7 932 aa12.12□□□□□ -0.47
CSTF1-208ENST00000613138 SPENQ96T58 3664 aaKnown RBP12.12□□□□□ -0.47
CSTF1-208ENST00000613138 FEZF1A0PJY2 475 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 EIF3FO00303 357 aaPredicted RBP12.11□□□□□ -0.47
CSTF1-208ENST00000613138 ITGB2P05107 769 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 C8GP07360 202 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 CDH1P12830 882 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 MC1RQ01726 317 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 PRDX1Q06830 199 aaKnown RBP12.11□□□□□ -0.47
CSTF1-208ENST00000613138 BMPR2Q13873 1038 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 ARHGAP19Q14CB8 494 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 NCF4Q15080 339 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 TSNQ15631 228 aaKnown RBP12.11□□□□□ -0.47
CSTF1-208ENST00000613138 PPP1R3AQ16821 1122 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 PRAMEF13Q5VWM6 474 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 BORAQ6PGQ7 559 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 COX15Q7KZN9 410 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 GABPB2Q8TAK5 448 aaPredicted RBP12.11□□□□□ -0.47
CSTF1-208ENST00000613138 UHMK1Q8TAS1 419 aaKnown RBP12.11□□□□□ -0.47
CSTF1-208ENST00000613138 MCOLN3Q8TDD5 553 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 ZUFSPQ96AP4 578 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 ZNF285Q96NJ3 590 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 OR4K3Q96R72 315 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 RBBP8Q99708 897 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 FAM117AQ9C073 453 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 SPNS1Q9H2V7 528 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 CUTCQ9NTM9 273 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 INTS7Q9NVH2 962 aaKnown RBP12.11□□□□□ -0.47
CSTF1-208ENST00000613138 NINJ2Q9NZG7 142 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 KCND3Q9UK17 655 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 TCFL5Q9UL49 500 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
CSTF1-208ENST00000613138 KLK4Q9Y5K2 254 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 KCNMB2Q9Y691 235 aa12.11□□□□□ -0.47
CSTF1-208ENST00000613138 CTAGE15A4D2H0 777 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 TARM1B6A8C7 271 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 C21orf140B9A014 251 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 LCMT2O60294 686 aaKnown RBP12.1□□□□□ -0.47
CSTF1-208ENST00000613138 ALOX12BO75342 701 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 KLF7O75840 302 aaPredicted RBP12.1□□□□□ -0.47
CSTF1-208ENST00000613138 CTAGE8P0CG41 777 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 RPS15P62841 145 aaKnown RBP12.1□□□□□ -0.47
CSTF1-208ENST00000613138 CAV1Q03135 178 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 DLG1Q12959 904 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 NFATC3Q12968 1075 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 SP140Q13342 867 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 NKAIN1Q4KMZ8 207 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 TLDC1Q6P9B6 456 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 CTAGE6Q86UF2 777 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 CTAGE4Q8IX94 777 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 ADAMTS17Q8TE56 1095 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 TRIM44Q96DX7 344 aaPredicted RBP12.1□□□□□ -0.47
CSTF1-208ENST00000613138 CCDC138Q96M89 665 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 ZFYVE21Q9BQ24 234 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 NDC1Q9BTX1 674 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 NLNQ9BYT8 704 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 CCDC177Q9NQR7 707 aaPredicted RBP12.1□□□□□ -0.47
CSTF1-208ENST00000613138 ZNF71Q9NQZ8 489 aaPredicted RBP12.1□□□□□ -0.47
CSTF1-208ENST00000613138 TXLNGQ9NUQ3 528 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 ARL15Q9NXU5 204 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 CTSFQ9UBX1 484 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 SNX7Q9UNH6 387 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 RUVBL1Q9Y265 456 aaKnown RBP12.1□□□□□ -0.47
CSTF1-208ENST00000613138 AP1M2Q9Y6Q5 423 aa12.1□□□□□ -0.47
CSTF1-208ENST00000613138 HMX2A2RU54 273 aa12.09□□□□□ -0.47
CSTF1-208ENST00000613138 NCF1BA6NI72 391 aaPredicted RBP12.09□□□□□ -0.47
CSTF1-208ENST00000613138 ARGFXA6NJG6 315 aa12.09□□□□□ -0.47
CSTF1-208ENST00000613138 NCF1CA8MVU1 366 aaPredicted RBP12.09□□□□□ -0.47
CSTF1-208ENST00000613138 NDC80O14777 642 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms