RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TEAD2Q15562 447 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SMU1Q2TAY7 513 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 GALNT18Q6P9A2 607 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CASP12Q6UXS9 341 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 TMC5Q6UXY8 1006 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 OR2T11Q8NH01 316 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PPP1R14BQ96C90 147 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 VPS35Q96QK1 796 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 P2RY12Q9H244 342 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 HS3ST2Q9Y278 367 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PCDHA9Q9Y5H5 950 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 KLK8O60259 260 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 NDUFS2O75306 463 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PDYNP01213 254 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MPC1LP0DKB6 136 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CCL5P13501 91 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 GRIA2P42262 883 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SLC7A9P82251 487 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 KCNC3Q14003 757 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 NR1D2Q14995 579 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 IFI44LQ53G44 452 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 BEND7Q8N7W2 519 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 ISOC1Q96CN7 298 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PAWRQ96IZ0 340 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 HERC2P3Q9BVR0 1158 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 INTS6Q9UL03 887 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 FZD4Q9ULV1 537 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MAFFQ9ULX9 164 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 USP22Q9UPT9 525 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 LOC100506127A0A0U1RQW1 187 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SYNDIG1LA6NDD5 238 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SNTNA6NMZ2 147 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CLDN25C9JDP6 229 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SLC16A5O15375 505 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 HPRP00739 348 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CAPNS1P04632 268 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CTSOP43234 321 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 PRKAG1P54619 331 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MAPK11Q15759 364 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PERM1Q5SV97 790 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 C10orf62Q5T681 223 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 SLC22A15Q8IZD6 547 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CYB5D2Q8WUJ1 264 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MYDGFQ969H8 173 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 FAM210AQ96ND0 272 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 AIF1LQ9BQI0 150 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CCM2Q9BSQ5 444 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 C6orf62Q9GZU0 229 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 RBM38Q9H0Z9 239 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 LINC00597Q9H2U6 94 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PREBQ9HCU5 417 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 IMP3Q9NV31 184 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 ZNF282Q9UDV7 671 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.19□□□□□ -1.42
SNX13-213ENST00000611725 MAP4K5Q9Y4K4 846 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 H0Y858 1186 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 RGS5O15539 181 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 RFPL2O75678 378 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CCDC159P0C7I6 412 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 LAMP1P11279 417 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 ZNF182P17025 639 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 BDKRB1P46663 353 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 TMEM115Q12893 351 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 ENPP6Q6UWR7 440 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PARP8Q8N3A8 854 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 ZNF548Q8NEK5 533 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 ASB11Q8WXH4 323 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 DUS3LQ96G46 650 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 PYURFQ96I23 114 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 BBS4Q96RK4 519 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 ACPTQ9BZG2 426 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 IL21Q9HBE4 155 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 ZNF334Q9HCZ1 680 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 DUS2Q9NX74 493 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 GVINP1Q7Z2Y8 2422 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 A0A1B0GTW7 788 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ZNF701M0R085 212 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 OR10H3O60404 316 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ABCB7O75027 752 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SERPINB7O75635 380 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 DNAJA1P31689 397 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 CCR3P51677 355 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 DEFB103AP81534 67 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SPIBQ01892 262 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 IL18R1Q13478 541 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 APOFQ13790 326 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 RUNDC3AQ59EK9 446 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 GCNT6Q5T4J0 391 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 OR4K1Q8NGD4 311 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 OR4A15Q8NGL6 344 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 BTN2A2Q8WVV5 523 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 TFGQ92734 400 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 FAIM2Q9BWQ8 316 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SLC2A11Q9BYW1 496 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 KAT8Q9H7Z6 458 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 THUMPD1Q9NXG2 353 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 A0A1W2PRB8 838 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ARHGEF33A8MVX0 844 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 KPNA4O00629 521 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 MED26O95402 600 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms