RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CAPN13Q6MZZ7 669 aaPredicted RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 TP63Q9H3D4 680 aaPredicted RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 TMEM248Q9NWD8 314 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 RWDD3Q9Y3V2 267 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 KIF13AQ9H1H9 1805 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 ANKRD66B4E2M5 251 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 PPP6CO00743 305 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 BMP7P18075 431 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 ATF4P18848 351 aaPredicted RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 EDNRBP24530 442 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 GABRB3P28472 473 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 DCP2Q8IU60 420 aaKnown RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 UMODL1-AS1Q8N2C9 162 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 FAM120CQ9NX05 1096 aaKnown RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 PCTPQ9UKL6 214 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 PADI3Q9ULW8 664 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 PCDHGB6Q9Y5F9 930 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 PCDHGA4Q9Y5G9 962 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 KIAA0513O60268 411 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 ARSAP15289 507 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 CLCN4P51793 760 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 DESI1Q6ICB0 168 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 ZNF367Q7RTV3 350 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 XAGE5Q8WWM1 108 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 GEMIN6Q8WXD5 167 aaKnown RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 TEPSINQ96N21 525 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 C1QTNF1Q9BXJ1 281 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 ERVK13-1Q9NX77 482 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 SEC14L4Q9UDX3 406 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 PCDHGB5Q9Y5G0 923 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 AP3D1O14617 1153 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 VIPP01282 170 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 GADD45AP24522 165 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 SUZ12Q15022 739 aaKnown RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 MS4A13Q5J8X5 152 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 PM20D1Q6GTS8 502 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 SHQ1Q6PI26 577 aaKnown RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 ZSWIM9Q86XI8 627 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 PAPD5Q8NDF8 572 aaKnown RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 MGLLQ99685 303 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 SLITRK2Q9H156 845 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 WDR6Q9NNW5 1121 aaKnown RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 MS4A12Q9NXJ0 267 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 CMAHPQ9Y471 501 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 GRXCR2A6NFK2 248 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 TSPAN4O14817 238 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 ALPLP05186 524 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 STSP08842 583 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 ZNF157P51786 506 aaPredicted RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 MAPK12P53778 367 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 TAS2R41P59536 307 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 RPS24P62847 133 aaKnown RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 SOX4Q06945 474 aaPredicted RBP14.25□□□□□ -0.13
VPS36-207ENST00000611132 ABRAXAS2Q15018 415 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 AGAP7PQ5VUJ5 663 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 MACC1Q6ZN28 852 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 CLDN19Q8N6F1 224 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 FUBP3Q96I24 572 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS36-207ENST00000611132 CD244Q9BZW8 370 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 RAD18Q9NS91 495 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 TMEM45AQ9NWC5 275 aa14.25□□□□□ -0.13
VPS36-207ENST00000611132 FAM92AA1XBS5 289 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 RETP07949 1114 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 HTR6P50406 440 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 CREB5Q02930 508 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 TGM3Q08188 693 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 TARDBPQ13148 414 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS36-207ENST00000611132 ALFQ53S48 1182 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 MED27Q6P2C8 311 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 MTSS1LQ765P7 747 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 ELMOD2Q8IZ81 293 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 PELI3Q8N2H9 469 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 RHOXF1Q8NHV9 184 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 MND1Q9BWT6 205 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 CDH7Q9ULB5 785 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 COL18A1P39060 1754 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 I3L521 148 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 GUCY1B2O75343 617 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 URODP06132 367 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 HAPLN1P10915 354 aaPredicted RBP14.24□□□□□ -0.13
VPS36-207ENST00000611132 BCKDHAP12694 445 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 IL7P13232 177 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 HTR1BP28222 390 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 ARRB2P32121 409 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 XKP51811 444 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 PKDCCQ504Y2 493 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 RNASE12Q5GAN4 147 aaKnown RBP14.24□□□□□ -0.13
VPS36-207ENST00000611132 CXorf57Q6NSI4 855 aaKnown RBP14.24□□□□□ -0.13
VPS36-207ENST00000611132 CHCHD4Q8N4Q1 142 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 MEIOBQ8N635 442 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 USP7Q93009 1102 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 FUBP1Q96AE4 644 aaKnown RBP14.24□□□□□ -0.13
VPS36-207ENST00000611132 GINS4Q9BRT9 223 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 CCDC32Q9BV29 185 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 FAIM2Q9BWQ8 316 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 SMURF1Q9HCE7 757 aa14.24□□□□□ -0.13
VPS36-207ENST00000611132 PAK6Q9NQU5 681 aaPredicted RBP14.24□□□□□ -0.13
VPS36-207ENST00000611132 TREX1Q9NSU2 369 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms